ID   AB188899; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB188899;
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DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
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DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: GRC44.
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KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
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RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
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DR   MD5; 83054e82527b9f839dae202876424c18.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="GRC44"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689U7"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q689U7"
FT                   /protein_id="BAD38718.1"
FT                   /translation="MAAVTFAPAITNAITDKSSSTGMIQFGNFPPVSLRSTIATTVVTS
FT                   VARPKLYTMQFGSLDPVIVKGVAGSSAKETRQQLNVKEDVNLRGTAALEVAKPQPSIEE
FT                   RMQEEARKERAIFQELGNKLGRRSYGIAENEKIIMTARGFSKIVPKSKKEMKHKRAKER
FT                   RNSQHSIVLEWDSTVSKISIGGGPSANVIEAEEARTKWPLHKTPSMKKKTVHKARRMNG
FT                   QGIDMLMRSLIKIFKAKDAIIEYTGRKSIKIDFVKKEQTKFARVQVAHLLGKRSQRDLS
FT                   TGVEENRFIDILSEYSGSKRVINPGVVCAGWSGIIVKNGVLVQKQSRSPSKAFVIRGEH
FT                   EGKLYDARIKVTKMMSHKIVHF"
FT   mat_peptide     1..>1086
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1086 BP; 355 A; 223 C; 279 G; 229 T; 0 other;
     atggcagcag tcacattcgc accagcaatc accaacgcca tcaccgacaa atcatcatcc        60
     accggaatga tacagtttgg gaatttccca ccagtgtcgt tacgatccac catcgctacc       120
     acagtcgtca catcagtggc gcgacccaaa ttgtacacaa tgcaatttgg aagccttgac       180
     ccagtaatcg tcaagggtgt agcagggtcc tctgctaagg aaacccgcca gcagcttaac       240
     gttaaagaag acgttaacct cagggggacc gcagctttgg aggttgcaaa accccaaccg       300
     agtattgagg agaggatgca ggaggaagca cgcaaagaga gagcgatttt ccaggaactt       360
     gggaacaaac ttgggaggcg ctcatatggt attgctgaaa atgagaagat catcatgaca       420
     gctcgtggtt tcagcaaaat agtacccaag agcaagaagg aaatgaagca caagcgtgcc       480
     aaagagaggc gcaattcaca acattcaatt gtgcttgaat gggattctac ggtgagtaag       540
     atttcaattg gaggagggcc ttctgctaac gtaatagaag cagaagaagc tcgcacaaag       600
     tggccgctac acaagacacc gtcaatgaag aaaaagacgg tacataaagc gcgcagaatg       660
     aatggccagg gaattgatat gttgatgcgt tccttgatca aaatcttcaa ggcaaaggac       720
     gccatcattg aatacactgg acgaaagtct attaaaatag actttgtcaa gaaagagcaa       780
     acaaaatttg ctagggtcca agtggcgcat ttacttggga agagatcaca gcgtgacttg       840
     tccactggag tggaggaaaa tcgcttcatc gatattttga gcgaatattc aggtagcaag       900
     agagttataa acccgggagt ggtatgcgct ggctggagtg gaatcattgt taagaatgga       960
     gttttagtcc agaagcagag cagaagtccg tcaaaagcct ttgtaatcag aggcgagcac      1020
     gaaggtaaat tgtacgatgc caggattaaa gtcacaaaga tgatgagcca taagattgtg      1080
     cacttt                                                                 1086
//