ID   AB188884; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB188884;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: GBR38.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 0cd32e5a87729bcd67f4038b562ad45f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="GBR38"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689W2"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q689W2"
FT                   /protein_id="BAD38703.1"
FT                   /translation="MAAVTFASAITNAITNKPALTGMVQFGSFPPTPLRSTTVTAVATS
FT                   VAQPKLYTVQFGSLDPVVVKGGAGSSAKATRQQPNVKTDVSLSEAAALEVAKPKSNAVL
FT                   RMHEEANKERALFLDWETSLKRSSYGIAENEKVVMTTRGVSKVVPRSSRAMKQKRARER
FT                   RRAQQPIVLKWEPKLSAISIGGGLSASAIEAEEVRTKWPLHKTPSMRKRTVHRTCKMND
FT                   QGVDMLTRSLVKIFKTKSANIEYIGKKSIKVDFIRKERTKFARIQVAHLLGKRAQRDLS
FT                   TGMEENHFIDILSGYSGNKTTINPGVVCAGWSGVVVRDGILTQKRSRSPSEAFVIRGEH
FT                   EGKLYDARIKVTKTMSHKIVHF"
FT   mat_peptide     1..>1086
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1086 BP; 352 A; 239 C; 284 G; 211 T; 0 other;
     atggcagcag ttacattcgc atcagctatc accaacgcca tcaccaacaa accagcactc        60
     accggaatgg tacagtttgg gagtttccca ccaacgccat tgcgatccac caccgtcacc       120
     gcagtcgcca cttcagtggc gcaacctaaa ctgtacacag tgcagtttgg aagtcttgac       180
     ccagtagtcg tcaagggtgg agcagggtcc tctgctaagg caacacgcca gcagcctaac       240
     gttaaaacag acgttagcct cagtgaagcc gcagctctgg aggttgcgaa acctaaatcg       300
     aatgccgtgt tgagaatgca cgaggaagca aacaaggaga gagcactctt tttggactgg       360
     gagactagtt tgaagagaag ctcgtatgga attgctgaga acgagaaggt tgtaatgaca       420
     actcgtggcg ttagcaaggt agtgcccaga agttcaaggg caatgaagca aaagcgcgca       480
     agggagaggc gtagagcgca gcaaccaatt gtactaaaat gggagcccaa attgagtgcg       540
     atctcaattg gaggaggact ctctgcgagc gcgatcgaag cagaagaagt tcgcacaaag       600
     tggccgcttc acaagacacc gtcaatgagg aagaggacgg tgcacagaac atgcaagatg       660
     aacgaccaag gagttgatat gttgacacga tccctagtta agattttcaa aactaagagt       720
     gccaacatcg agtacatcgg aaagaaatcg atcaaggtcg atttcatcag aaaagagcgg       780
     acgaaattcg caagaatcca agtagcacac ttactcggga agcgagcaca acgcgacttg       840
     tcaactggaa tggaagaaaa ccattttatc gatattctca gcggatactc aggtaataaa       900
     acaaccataa atccaggagt agtttgcgca ggttggagtg gcgtagtcgt tagagatgga       960
     attctaaccc agaaacgaag caggagtcca tcagaggcct ttgtaattag aggtgaacac      1020
     gaaggcaagt tgtatgatgc cagaatcaaa gtcacgaaaa caatgagtca caagattgtg      1080
     cacttt                                                                 1086
//