ID   AB188879; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB188879;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: GBR27.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; a0115387650ff3aee3facbaf9e5db153.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="GBR27"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689W7"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q689W7"
FT                   /protein_id="BAD38698.1"
FT                   /translation="MAAVTFASAITNATTNKPALTGMVQFGSFPPMPLRSTTVTTVATS
FT                   VAQPKLYTVQFGSLDPVVVKSGAGSFAKATRQQPNVEIDVSLSEAAALEVARPRSNAVL
FT                   RMHEEANKERALFLDWEASLKRSSYGIAENEKVVMTTRGVSKIVSRSSRAMKQKRARER
FT                   RRAQQPIILKWEPKLSGISIGGGPSANVIEAEEVRTKWPLHKTPSMKERTVHRTCKMND
FT                   QGIDMLTRSLVKIFKTKSANIEYIGKKSIKVDFIRKERTKFARIQVAHLLGKRAQRDLS
FT                   TGMEENHFIDILSGYSGNKTTINPGVVCAGWSGIVVRNGILTQKRSRSPSEAFVIRGEH
FT                   EGKLYDARTKVTRTMSHKIVHF"
FT   mat_peptide     1..>1086
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1086 BP; 350 A; 237 C; 288 G; 211 T; 0 other;
     atggcagcag ttacattcgc atcagctatc accaacgcca ccaccaacaa accagcactc        60
     accggaatgg tacagtttgg gagtttccca ccaatgccat tgcgatccac caccgtcacc       120
     acagtcgcca cttcagtggc gcaacctaaa ctgtacacag tgcagtttgg aagccttgac       180
     ccagtagtcg tcaagagtgg agcagggtcc tttgctaagg caacacgcca gcagcctaac       240
     gttgaaatag acgttagcct cagtgaagcc gcagctctgg aggttgcgag acctagatcg       300
     aatgccgtgt tgagaatgca cgaggaagca aacaaggaga gagcactctt tttggactgg       360
     gaggctagtt tgaagagaag ctcgtatgga attgctgaga acgagaaggt tgtaatgaca       420
     actcgcggcg tcagcaagat agtatccaga agttcaaggg caatgaagca aaagcgcgca       480
     agggagaggc gtagagcgca gcaaccaatt atactaaagt gggagcccaa attgagcggg       540
     atctcaatcg gaggagggcc ctctgcgaac gtgatcgaag cagaagaggt tcgcacaaag       600
     tggccgcttc ataagacacc gtcaatgaag gagaggacgg tgcacagaac atgcaagatg       660
     aacgaccaag gaattgacat gttgacacga tctctggtta agattttcaa gactaagagt       720
     gccaacattg agtacatcgg aaagaagtcg attaaggtcg atttcatcag aaaagaacgg       780
     acgaaattcg caagaatcca agtagcacac ttactcggga agagagcaca gcgcgactta       840
     tcaactggaa tggaagaaaa ccattttatt gacattctca gtggatactc aggtaacaaa       900
     acaaccataa atccaggagt agtttgcgca ggttggagtg gcatagtcgt tagaaatgga       960
     attctaactc agaaacgaag cagaagtcca tcagaggcct ttgtaattag aggtgagcac      1020
     gaaggcaagt tgtacgatgc caggaccaaa gtcacgagga caatgagtca caagattgtg      1080
     cacttt                                                                 1086
//