ID   AB188875; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB188875;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: Eru1D.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 0b643c93132d03119c4bfb7d2d1cdf00.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="Eru1D"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689X1"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q689X1"
FT                   /protein_id="BAD38694.1"
FT                   /translation="MAAVTFASAITKATVNGSTSIGMVQFGNFPPVPLRSTTAITVATP
FT                   VAQPKLHTVQFGSLDSVVVKGESGSSAKETRRQLNVKEDVNLRGTAALEVVKPQSSIVL
FT                   RMQEEANRERAIFLDFENSLGRRPYGIAKNEKVIMTTRGVSKIVPISTRAMKHKRARER
FT                   RRLEQPIILKWEPKLSEFSIGGGPSAKAIEEEETHTKWPLHKTPSMKKRTVHKKSKMDN
FT                   QGIEMLMRSLIKISKAKNVNIEFTDKKTIKVDFVRKEQTKFARIQVAHLLGKRGKRDLL
FT                   SGKKENQFIDILSSYSGNMKTIQPGVVCAGWSGIVVRDGILTQKRSRSPSQAFVIRGEH
FT                   EGKLYDARVKVTRTMSHKIVHF"
FT   mat_peptide     1..>1086
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1086 BP; 370 A; 227 C; 266 G; 223 T; 0 other;
     atggcagcag tcacatttgc atcagcaatc accaaagcca ccgtcaacgg atcgacatcc        60
     atcggaatgg tacaatttgg gaatttccca ccagtgccac tacgatccac caccgctatc       120
     acagttgcca ccccagtggc acaacccaag ttacacacag tgcaatttgg aagccttgac       180
     tcagtagtcg ttaagggtga atcagggtcc tctgctaagg aaacccgccg gcagcttaac       240
     gttaaagaag acgttaacct cagggggacc gcggctttgg aggttgtgaa gccccaatcg       300
     agcattgtac taaggatgca ggaggaagca aacagagaga gggcaatttt ccttgatttt       360
     gaaaatagtc ttggaaggcg cccatatggc attgccaaga atgaaaaggt tatcatgaca       420
     actcgaggtg tcagcaaaat agtgcctata agcacaagag caatgaaaca caaacgagct       480
     agagaaagac gcagattgga acagccaatc atcctaaagt gggaacccaa gctcagcgaa       540
     ttctcaattg gaggagggcc ttctgctaaa gcaattgaag aagaggaaac ccacacaaag       600
     tggccattgc ataagacacc atcgatgaag aaaaggacag tgcataagaa aagcaaaatg       660
     gacaatcaag gaattgaaat gctaatgcgc tccttgatca aaatttccaa agccaagaac       720
     gttaatattg aattcactga taagaaaact atcaaagtgg atttcgtgag gaaggagcaa       780
     acaaagttcg ctagaataca agtagcgcac ttacttggaa agagaggaaa gcgcgatcta       840
     ttgtctggta agaaggagaa tcaattcatt gacattctca gcagctattc aggcaacatg       900
     aaaacaatac aaccaggagt agtttgcgct ggctggagtg ggatcgtcgt cagagatgga       960
     atcctaactc agaagcgaag taggagcccg tcacaagctt ttgtgattag aggcgagcat      1020
     gagggtaagt tgtacgatgc cagagttaaa gtgacacgaa ctatgagcca taagatcgtg      1080
     catttt                                                                 1086
//