ID   AB188871; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB188871;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: DEU7.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; bebb7ef8ac6d28c06c20d14f43e0e8a7.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="DEU7"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689X5"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q689X5"
FT                   /protein_id="BAD38690.1"
FT                   /translation="MAAVTFAAAITNTITNKPASTGMVQFGSFLPTPLRSNTITTVANP
FT                   VAQPKLYTVQFGSLDPVLVKGGAGSFAKATRQQPNVEIDVSLSEAAALEVAKPEPNAVL
FT                   RMHEEDNKRRAIFLDLESKLNRRPYGIADNEKIIITARGVSKIVPRSTRAMKHKRARER
FT                   RRAQQPILLKYEPILNELSIGGGPSANAIEAEEVRTKWPLHKTPSMKKRVVHKTCKMDT
FT                   QGVEMFTRSLIKIFKAKNASIEFTARKTIRVDFVRKEQMKFARIQVAHLLGIRKKRDLS
FT                   SGVKENQFIDMLSNYSGSARTLQTGVVCAGWSGIVVRNGTLTQRRSRSPSQAFVIRGEH
FT                   EGKLYDARIKVTKTMSHKIVHF"
FT   mat_peptide     1..>1086
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1086 BP; 364 A; 248 C; 263 G; 211 T; 0 other;
     atggcagcag ttacattcgc agcagcaatc accaacacca tcaccaacaa accagcatcc        60
     accggaatgg tacagtttgg gagcttccta ccaacgccat tgcgttccaa caccatcacc       120
     acagtcgcca atccagtggc gcaacctaag ctgtatacag tacagtttgg aagccttgac       180
     ccagtattag tcaagggtgg agcagggtcc tttgctaagg caacacgcca gcagcctaac       240
     gttgaaatag acgttagcct cagtgaagcc gcagctctgg aggttgcgaa acctgaaccg       300
     aatgccgtat tgaggatgca cgaggaagac aacaaacgaa gagcaatctt tctagacttg       360
     gaaagcaagc taaataggcg cccatatggc attgctgaca acgagaaaat catcataaca       420
     gctcgtggcg tcagcaaaat agtgcctaga agcacaaggg caatgaaaca caagcgtgcc       480
     agagaaagac gtagagcgca acagccgatt ctactaaagt acgaacccat acttaatgag       540
     ctctcgattg gaggagggcc ttctgcaaat gctattgaag cagaggaggt tcgcaccaag       600
     tggccactgc acaagacgcc atcaatgaag aaaagagtag tgcacaagac gtgcaaaatg       660
     gacacccaag gggtcgaaat gtttacgcgt tccctgataa aaatcttcaa ggcaaagaat       720
     gcgagcatcg aattcactgc aaggaaaacc attagagttg actttgtgag aaaagagcaa       780
     atgaaatttg ctagaattca agtggcacac ttactcggaa tacgaaagaa acgcgatttg       840
     tcatccggcg taaaagagaa ccaattcatt gatatgctca gcaactattc aggcagtgca       900
     agaactttac agacaggagt ggtatgcgct ggctggagtg gaatcgtcgt taggaacgga       960
     accttaactc agaggcgaag tagaagccca tcacaagcct tcgtaattag aggtgaacat      1020
     gagggcaagc tgtacgacgc tagaattaaa gtgacgaaaa ctatgagcca taaaatcgta      1080
     catttc                                                                 1086
//