ID   AB188870; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB188870;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: DEU5.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 0de303ec31359155c77fb0161af35e7e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="DEU5"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689X6"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q689X6"
FT                   /protein_id="BAD38689.1"
FT                   /translation="MAAVTFASAITNAIINKPTSTGMVQFGSFPPMPLRSTTIITVATP
FT                   VAQSKLYTVQFGSLDPVVVKGGAGSLAKATRQQLNVEIDVNLSEAAALEVAKPKSSAVL
FT                   RMHEEANKERALFLDWETGLKRRSHGIAENEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPITLKWEPELSEFSIGGGSSASAIEAEEVRTKWPLHKTPSLKKRMVHKTCKMSD
FT                   QGVDMLIRSLVKIFKAKSANIEYIRKKSIKVDFIRKERTKFARVQVAHLLGKRAQRDLL
FT                   AGVEENHFIDILSEYSGNKTVINPGVVCAGWSGVIVRNEVLTQKRSRSPSKAFVIRGEH
FT                   EGKLYDARIKITKTMSLKIVHF"
FT   mat_peptide     1..>1086
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1086 BP; 343 A; 239 C; 288 G; 216 T; 0 other;
     atggcagcag tcacatttgc atcagcaatc accaacgcca tcatcaacaa acctacatcc        60
     accggaatgg tacagttcgg gagcttccca ccaatgccat tacgttccac caccatcatc       120
     acagtcgcca ctccagtggc gcaatctaaa ctgtacacag tgcagtttgg aagccttgac       180
     ccagtagtcg tcaagggtgg agcagggtcc cttgctaagg ccacacgcca gcagcttaac       240
     gttgaaatag acgttaacct cagtgaagcc gcagctctgg aggttgcaaa acccaagtcg       300
     agtgccgtgt tgaggatgca cgaggaagca aacaaggaga gagcactctt tttggactgg       360
     gaaaccggtc taaagagacg ctcgcatgga attgctgaga acgagaaggt cgtgatgaca       420
     actcgtggcg ttagtaagat agtgcccaga agttcaagag cgatgaagca aaagcgcgca       480
     agagagaggc gtagagcaca gcaaccaatc accctaaaat gggagcccga attgagtgag       540
     ttctcaattg gaggaggatc ttctgcgagt gcgattgaag cagaggaagt tcgcacaaag       600
     tggccacttc acaagacacc gtcattgaag aagaggatgg tgcacaagac atgcaagatg       660
     agcgatcaag gagttgatat gttaatacgc tctctggtta agatcttcaa ggctaagagc       720
     gccaacatcg agtacatcag aaagaagtca attaaggttg atttcattag gaaagagcga       780
     acgaagttcg caagagttca agtagcacac ctgctcggaa agagagcaca gcgcgatttg       840
     ttagccggag tggaagagaa ccactttatt gacattctca gcgagtactc aggcaacaaa       900
     acagtcataa acccaggagt ggtatgtgcc ggttggagcg gagtgatcgt taggaacgaa       960
     gttctaactc agaaacggag cagaagtcca tcaaaagctt ttgtaatcag gggtgagcac      1020
     gaaggcaagt tgtatgatgc cagaatcaag atcacaaaaa cgatgagtct taagatcgtg      1080
     catttc                                                                 1086
//