ID   AB188868; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB188868;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: DEU1.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 4ca3585d7213aa70055472c46a234343.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="DEU1"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689X8"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q689X8"
FT                   /protein_id="BAD38687.1"
FT                   /translation="MAAVTFASAITNAITNKPTSTGMVQFGSFPPMPLRSTTITTVATP
FT                   VAQPKLYTVQFGSLDPVVVKGGAGSLAKATRQQPNVEIDVSLSEAAALEVAKPKSSAVV
FT                   RMHEEANKERALFLDWETSLKRRSYGIAENEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPITLKWEPKLSEFSIGGGLSASAIEAEEVRTKWPLHKTPSMKKRMVYKTCKMND
FT                   QGVDMLIRSLVKIFKAKSANIEYIGKKSIKADFIRKERTKFARVQVAHLLGKRAQRDLL
FT                   AGVEENHFIDILSEYSGNKTVINPGVVCAGWSGVIVKNEILTQKRSRSPSKAFVIRGEH
FT                   EGKLYDARIKITKTMSLKIMHF"
FT   mat_peptide     1..>1086
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1086 BP; 352 A; 241 C; 283 G; 210 T; 0 other;
     atggcagcag tcacattcgc atcagcaatc accaacgcca tcaccaacaa acctacatcc        60
     accggaatgg tacagttcgg gagcttccca ccaatgccat tacgttccac caccatcacc       120
     acagtcgcca ctccagtggc gcaacctaaa ttgtacacag tgcagtttgg aagccttgac       180
     ccagtagtcg tcaagggtgg agcagggtcc cttgctaagg caacacgcca gcagcctaac       240
     gttgaaatag acgttagcct cagtgaagcc gcagctctgg aggttgcgaa acccaagtcg       300
     agtgccgtgg tgaggatgca cgaggaagca aacaaggaga gagcactctt cttggactgg       360
     gaaaccagtc taaagagacg ctcgtatgga attgctgaga acgagaaggt cgtgatgaca       420
     actcgtggtg tcagtaagat agtgcccaga agttcaaggg caatgaaaca aaagcgcgca       480
     agagagaggc gaagagcaca gcaaccaatc accctaaaat gggagcccaa actgagtgag       540
     ttctcaattg gaggaggact ttctgcgagt gcgatcgaag cagaggaagt tcgcacaaag       600
     tggccacttc acaagacacc atcaatgaag aagaggatgg tgtacaaaac atgcaagatg       660
     aacgaccaag gagttgatat gttaatacgc tctctggtta agatcttcaa ggctaagagc       720
     gccaacatcg agtacatcgg aaagaagtca attaaggctg atttcattag gaaagagcgg       780
     acgaagttcg caagagttca agtagcacac ttacttggaa agagagcaca gcgcgatttg       840
     ttagccggag tggaagagaa ccactttatt gatattctca gtgagtactc aggcaacaaa       900
     acagttataa acccaggagt ggtatgcgcc ggttggagcg gagtaatcgt taagaatgaa       960
     attctaactc agaaacggag cagaagtcca tcaaaagctt tcgtaatcag gggtgagcac      1020
     gaaggcaagt tgtatgatgc caggatcaag atcacgaaaa caatgagtct taagatcatg      1080
     catttc                                                                 1086
//