ID   AB188866; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB188866;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: CZE18.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 034d10730de1a7dce435c342eec69486.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="CZE18"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689Y0"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q689Y0"
FT                   /protein_id="BAD38685.1"
FT                   /translation="MAAVTFAPAITNAITSKSASTGMVQFGSFPPVPLRSTVAVAAATP
FT                   VAQPRLYTVQFGSLDPVVVKGGAGSSAKATRQQPSIEIDASLREAAALEVAKPKPNAVV
FT                   RMHEEMNKERALFLDWEASLKRCSYGIAENEKVVMTTRGASKIVLRSSRAMKQKRARER
FT                   RRAQQPIILKWEPKPSELSIGGGPSANTIEAEEIRTKWPLHKTPSMKRKTIHKPCRMNK
FT                   QGIDMLMCSLIKIFKAKNANIEYTGRKSIKVDFIRKEKMKFARIQVEHLLGRRAQRDLS
FT                   TGGEENHFIDILSCYSGSKKAIKPGMICAGWSGVVVRYGALTQKRSRSPSEAFVVRGEH
FT                   EGKLYDARIKVTKTMSHKIIHF"
FT   mat_peptide     1..>1086
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1086 BP; 357 A; 244 C; 287 G; 198 T; 0 other;
     atggcagcag taacattcgc accagcaatc accaacgcca tcaccagcaa atcagcatcc        60
     accggaatgg tgcaatttgg gagtttccca ccagtaccat tacgatccac cgtcgctgtc       120
     gcagccgcca ccccagtggc gcaacctagg ctgtacacag tacagtttgg aagccttgac       180
     ccagtagtcg tcaagggcgg agcagggtcc tctgctaagg caacccgcca gcagcctagc       240
     attgaaatag atgctagcct cagggaagcc gcagctttgg aggttgcaaa acccaaaccg       300
     aatgccgtgg tgaggatgca cgaagaaatg aacaaggaga gagcactttt tctggactgg       360
     gaagccagct taaaaagatg ttcgtatggc atcgccgaga acgagaaagt cgtgatgaca       420
     actagaggag ccagtaagat agtgctcaga agttcaaggg caatgaaaca gaagcgtgca       480
     agagaaagac gcagggcgca acagccaata atcttgaaat gggagccgaa accgagtgag       540
     ctctctattg ggggaggacc ctctgcaaac acgattgaag cggaggaaat ccgcaccaag       600
     tggccactgc acaagacacc atcaatgaag aggaagacga tacacaagcc gtgtaggatg       660
     aacaaacaag gaattgacat gttaatgtgc tccttgatta aaatctttaa ggcaaagaac       720
     gccaacatcg agtacacagg aagaaaatcc atcaaggtgg atttcatcag gaaggagaag       780
     atgaagttcg ccagaatcca agtagaacat ctacttggga ggagagcgca acgtgatcta       840
     tcaactggag gagaagaaaa tcacttcatt gacattctta gctgctactc agggagcaag       900
     aaagccataa agccaggaat gatatgtgcc ggttggagcg gagttgtagt acgatatgga       960
     gctctaaccc agaaacgaag tagaagcccg tcggaggctt ttgtagttag aggcgagcac      1020
     gaaggcaaac tgtatgatgc tagaatcaag gttacaaaaa caatgagcca caagatcatt      1080
     catttc                                                                 1086
//