ID   AB188862; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB188862;
XX
DT   27-AUG-2004 (Rel. 81, Created)
DT   03-DEC-2004 (Rel. 82, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: CZE2.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (24-AUG-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga, 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1016/j.virol.2004.09.040.
RX   PUBMED; 15567435.
RA   Tomimura K., Spak J., Katis N., Jenner C.E., Walsh J.A., Gibbs A.J.,
RA   Ohshima K.;
RT   "Comparisons of the genetic structure of populations of Turnip mosaic virus
RT   in West and East Eurasia";
RL   Virology 330(2):408-423(2004).
XX
DR   MD5; 107805f9693950f860578c45ab150b1c.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="CZE2"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q689Y4"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q689Y4"
FT                   /protein_id="BAD38681.1"
FT                   /translation="MAAVTFASAITNAITSKPALTGMVQFGSFPPMPLRSTTVTTVATS
FT                   VAQPKLYTVQFGSLDPVVVKSGAGSLAKATRQQPNVEIDVSLSEAAALEVAKPRSNAVL
FT                   RMHEEANKERALFLDWEASLKRSSYGIAEDEKVVMTTHGVSKIVPRSSRAMKLKRAREK
FT                   RRAQQPIILKWEPKLSGISIGGGLSASVIEAEEVRTKWPLHKTPSMKKRTVHRICKMND
FT                   QGVDMLTRSLVKIFKTKSANIEYIGKKSIKVDFIRKERTKFARIQVAHLLGKRAQRDLL
FT                   TGMEENHFIDILSKYSGNKTTINPGVVCAGWSGIVVGNGILTQKRSRSPSEAFVIRGEH
FT                   EGKLYDARIKVTRTMSHKIVHF"
FT   mat_peptide     1..>1086
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1086 BP; 347 A; 235 C; 289 G; 215 T; 0 other;
     atggcagcag ttacattcgc atcagctatc accaacgcca tcaccagcaa accagcactc        60
     accggaatgg tgcagtttgg gagtttccca ccaatgccat tgcgatccac caccgtcacc       120
     acagtcgcca cttcagtggc gcaacctaaa ctgtacacag tgcagtttgg aagccttgac       180
     ccagtagtcg tcaagagtgg agcagggtcc cttgctaagg caacacgcca gcagcctaac       240
     gttgaaatag acgttagcct cagtgaagcc gcagctctgg aggttgcgaa acctagatcg       300
     aatgccgtgt tgaggatgca cgaggaagca aacaaggaga gagcactctt tttggactgg       360
     gaggctagtt tgaagagaag ctcgtatgga attgctgagg acgagaaggt tgtaatgaca       420
     actcatggcg tcagcaagat agtgcccaga agttcaaggg caatgaagct aaagcgcgca       480
     agggagaagc gtagagcgca gcaaccaatt atattaaagt gggagcccaa attgagcggg       540
     atctcaatcg gaggagggct ctctgcgagc gtaatcgaag cagaagaggt tcgcacaaag       600
     tggccgcttc ataagacacc gtcaatgaag aagaggacgg tgcacagaat atgcaagatg       660
     aacgaccaag gagttgacat gttgacacga tccctggtta agattttcaa gactaagagt       720
     gccaacattg aatacatcgg aaagaagtcg attaaggtcg atttcatcag aaaagaacga       780
     acgaaattcg caagaatcca agtagcacac ttactcggga agagagcaca gcgcgacttg       840
     ttaactggaa tggaagaaaa ccattttatt gacattctca gcaagtactc aggtaacaaa       900
     acaaccataa atcctggagt agtttgcgca ggttggagtg gcatagtcgt tggaaatgga       960
     attctaaccc agaaacgaag cagaagtcca tcagaggcct ttgtaattag aggtgagcac      1020
     gaaggcaagt tgtacgatgc caggatcaaa gtcacgagga caatgagtca caagattgtg      1080
     cacttt                                                                 1086
//