ID   AB188233; SV 1; linear; genomic RNA; STD; VRL; 2212 BP.
XX
AC   AB188233;
XX
DT   18-AUG-2011 (Rel. 109, Created)
DT   18-AUG-2011 (Rel. 109, Last updated, Version 1)
XX
DE   Cucumber mosaic virus RNA3 segment, complete sequence, isolate:Fuka4-4.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2212
RA   Natsuaki T.;
RT   ;
RL   Submitted (17-AUG-2004) to the INSDC.
RL   Contact:Tomohide Natsuaki Utsunomiya University, Faculty of Agriculture;
RL   Mine-machi 350, Utsunomiya, Tochigi 321-8505, Japan
XX
RN   [2]
RA   Suzuki M., Yokotsuka H., Matsumoto T., Kosaka Y., Okuda S., Natsuaki T.;
RT   "Complete genome comparison of Cucumber mosaic virus parental and
RT   attenuated isolates";
RL   Unpublished.
XX
DR   MD5; 3a4dbeee7f29041ca187fcd7654e35d6.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2212
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /isolate="Fuka4-4"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Saitama"
FT                   /isolation_source="cucumber"
FT                   /db_xref="taxon:12305"
FT   5'UTR           1..119
FT   CDS             120..959
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="3a"
FT                   /product="3a protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:F8WK12"
FT                   /protein_id="BAK61795.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDDLQKILFSPEAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIASFFKSGYDVGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIESSQYLLTNAKINQNARSESEELNVESPPPAIGSSSASRSEAFRPQVVNGL"
FT   CDS             1257..1913
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:F8WK13"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:F8WK13"
FT                   /protein_id="BAK61796.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSASSSSDANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSEPCKPGYTFTSITLKPPKIDRGSNYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDVEHQRIPTSGVLPV"
FT   3'UTR           1914..2212
XX
SQ   Sequence 2212 BP; 522 A; 517 C; 524 G; 649 T; 0 other;
     gtaatcttac cactgtgtgt gtgtgtgtgt gtatcgagtc gtgttgtccg cacatttgag        60
     tcgtgttgtc cgcacatata tattttattt gttgtacagt gtgttagatt tcccgaggca       120
     tggctttcca aggtaccagt aggactttaa ctcaacagtc ctcagcggct acgtctgacg       180
     atcttcaaaa gatattattt agccctgaag ccattaagaa aatggctact gagtgtgacc       240
     taggccggca tcattggatg cgcgctgata atgctatttc agtccggccc ctcgttcccg       300
     aagtaaccca cggtcgtatt gcttccttct ttaaatctgg atatgatgtt ggtgaattat       360
     gctcaaaagg atacatgagc gtccctcaag tgttatgtgc tgttactcga acagtctcca       420
     ctgatgctga agggtccttg agaatttact tagctgatct aggtgacaag gagttatctc       480
     ccatagatgg gcaatgcgtt tcgttacata accatgatct tcccgctttg gtgtctttcc       540
     aaccgacgta tgattgtcct atggaaacag ttgggaatcg taagcggtgt tttgctgttg       600
     tcatcgaaag acatggttac attgggtata ccggtaccac agctagcgtg tgtagtaatt       660
     ggcaagcaag gttttcgtct aagaataaca actacactca tatcgcagct gggaagactc       720
     tagtactgcc tttcaacaga ttagccgagc aaacaaaacc gtcagctgtc gctcgcctgt       780
     tgaagtcgca attgaacaac attgaatctt cgcaatattt gttaacgaac gcgaagatta       840
     atcagaatgc gcgcagtgag tccgaggaat taaatgttga gagccctccc cccgcaatcg       900
     ggagttcttc cgcgtcccgc tccgaagcct tcagaccgca ggtggttaac ggtctttagc       960
     actttggtgc gtattagtat ataagtattt gtgagtctgt acataatact atatctatag      1020
     tgtcctgtgt gagttgatac agtagacatc tgtgacgcga tgccgtgttg agaagggaac      1080
     acatctggtt ttagtaagcc tacatcatag ttttgaggtt caattcctct tactccctgt      1140
     tgagcccctt actttctcat ggatgcttct ccgcgagatt gcgttattgt ctactgacta      1200
     tatagagagt gtgtgtgctg tgttttctct tttgtgtcgt agaattgagt cgagtcatgg      1260
     acaaatctga atcaaccagt gctggtcgta accgtcgacg tcgtccgcgt cgtggttccc      1320
     gctccgcctc ctcctcctcg gatgctaact ttagagtctt gtcgcagcag ctttcgcgac      1380
     ttaacaagac gttagcagct ggtcgtccaa ctattaacca cccaaccttt gtagggagcg      1440
     aaccgtgtaa acctgggtac acgttcacat ctattaccct aaagccacca aaaatagacc      1500
     gtgggtctaa ttatggtaaa aggttgttat tacctgattc agtcacggaa tatgataaga      1560
     agcttgtttc gcgcattcaa attcgagtta atcctttgcc gaaatttgat tctaccgtgt      1620
     gggtgacagt ccgtaaagtt cctgcctcct cggacttatc cgttgccgcc atctctgcta      1680
     tgttcgcgga cggagcctca ccggtactgg tttatcagta tgccgcatct ggagtccaag      1740
     ctaacaacaa attgttgtat gatctttcgg cgatgcgcgc tgatataggc gacatgagaa      1800
     agtacgccgt cctcgtgtat tcaaaagacg atgcgctcga gacggacgag ctagtacttc      1860
     atgttgacgt cgagcaccaa cgcattccca catctggagt gctcccagtc tgattccgtg      1920
     ttcccagaat cctccctccg atttctgtgg cgggagctga gttggcagtt ttgctataaa      1980
     ctgtctgaag tcactaaacg tttttacggt gaacgggttg tccatccagc ttacggctaa      2040
     aatggtcagt cgtggagaaa tctacgccag cagatttaca aatctctgag gcgcctttga      2100
     aaccatctcc taggtttctt cggaaggact tcggtccgtg tacctctagc acaacgtgct      2160
     agtttcaggg tacgggtgcc ccactttcgt gggggcctct aaaaggagac ca              2212
//