ID AB188229; SV 1; linear; genomic RNA; STD; VRL; 3043 BP. XX AC AB188229; XX DT 18-AUG-2011 (Rel. 109, Created) DT 18-AUG-2011 (Rel. 109, Last updated, Version 1) XX DE Cucumber mosaic virus RNA2 segment, complete sequence, isolate:Mi. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3043 RA Natsuaki T.; RT ; RL Submitted (17-AUG-2004) to the INSDC. RL Contact:Tomohide Natsuaki Utsunomiya University, Faculty of Agriculture; RL Mine-machi 350, Utsunomiya, Tochigi 321-8505, Japan XX RN [2] RA Suzuki M., Yokotsuka H., Matsumoto T., Kosaka Y., Okuda S., Natsuaki T.; RT "Complete genome comparison of Cucumber mosaic virus parental and RT attenuated isolates"; RL Unpublished. XX DR MD5; c6a5d9a2b88537abf2fa610b9ba77f22. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..3043 FT /organism="Cucumber mosaic virus" FT /segment="RNA2" FT /isolate="Mi" FT /mol_type="genomic RNA" FT /country="Japan:Kyoto" FT /isolation_source="Mioga (Zingiber mioga)" FT /db_xref="taxon:12305" FT 5'UTR 1..85 FT CDS 86..2659 FT /codon_start=1 FT /transl_table=1 FT /gene="2a" FT /product="2a protein" FT /db_xref="GOA:F8WK05" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:F8WK05" FT /protein_id="BAK61788.1" FT /translation="MAFSAPAFSLANLLNGSYGVDTPEDVERLRSEQREEAAAACRNYR FT PLPAVDVSESVTEDAHSLQTPDGAPAEAVSDEFVTYGAEDYLEKSDDELLVAFETMVKP FT MRIGQLWCPAFNKCSFISSIAMARALLLAPRTSHRTMKCFEDLVAAIYTKSDFYYSEEC FT EADDVQMDISSRDVPGYSFEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKTCAER FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCQYEKCPTPTIAIPPNLNRATDRVDIN FT LVQSICDSTLPTHSNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGNSLASSN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPVP FT ATITYHKKSITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMAGFDVKNKHCLEID FT LSKFDKSQGEFHLLIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSQLSPVGDPSKFTTLYNMEA FT KVMEPSVPYICSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDNDEFLFAHFMSFVD FT RLKFLDRMSQSCIDQLSIFFELKYKKSGEEAALMLGAFKKYTANFQSYKELYYSDRRQC FT ELINSFCSTEFRVERINSNKQRKKHGIERRRDDKRRTPTGSYGGGEEAETKVSQAESTG FT TRSQKSQRESAFKSQTVPLPTVLSSGWSGTDRVMPPCERGGVTRA" FT CDS 2418..2750 FT /codon_start=1 FT /transl_table=1 FT /gene="2b" FT /product="2b protein" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:F8WK06" FT /protein_id="BAK61789.1" FT /translation="MELNVGAMTNVELQLARMVEAKKQRRRSHKQNRRERGHKSPSERA FT RSNLRLFRFLPFYQVDGPELTGSCRHVNVAELPEPEASRLELSAEDHDFDDTDWFAGNE FT WAEGTF" FT 3'UTR 2751..3043 XX SQ Sequence 3043 BP; 776 A; 677 C; 704 G; 886 T; 0 other; gtttatttac aagagcgtac ggttcaaccc ctgcctcctc tgtaaaactc cctagacttt 60 aaaacttctt tctagtatct tttctatggc tttctccgcc cccgcattct cactagccaa 120 tcttttgaat ggtagttacg gtgtcgacac tcccgaggat gtggaacgct tgcgatctga 180 gcaacgcgaa gaggctgccg cggcctgccg taattacagg cccttacccg ctgtggatgt 240 cagcgagagt gtcacagagg acgcgcattc cctccaaact cctgacggag ctcccgctga 300 agcggtgtct gatgagtttg taacttatgg tgctgaagat taccttgaaa aatctgatga 360 tgagctcctt gtcgcttttg agacgatggt caaacccatg cgtatcggac aactatggtg 420 ccctgcgttt aataaatgtt cttttatttc cagcattgct atggccagag ctttgctgtt 480 ggcacctaga acatcccacc gaaccatgaa gtgttttgaa gacctggtcg cggctattta 540 cactaaatct gatttctatt acagtgaaga gtgtgaagcc gacgacgttc agatggatat 600 ctcgtctcgc gatgtacccg gttattcttt cgaaccgtgg tcccgaacgt ctggattcga 660 accgccgccc atttgtgaag cgtgcgacat gatcatgtac cagtgcccgt gttttgattt 720 caatgcttta aagaaaacgt gcgctgagag gactttcgct gatgattatg ttattgaagg 780 tttagatggt gttgttgata atgcgactct gttgtcgaat ttgggtccat ttttggtacc 840 cgtgaagtgt caatatgaaa aatgtccaac gccaaccatc gcgattcctc cgaatttaaa 900 tcgtgccact gatcgtgttg atatcaattt agttcaatcc atttgtgact cgactctgcc 960 cactcatagt aactatgacg actcttttca tcaagtgttc gtcgaaagtg cagattactc 1020 catagatctg gatcatgtta gacttcgaca gtctgatctt attgcaaaaa ttccagactc 1080 agggcatatg ataccggttc tgaacaccgg gagcggtcac aagagagtag gtacaacgaa 1140 ggaggtcctt acagcaatta agaaacgtaa tgctgacgtt ccagagctag gtgattccgt 1200 taatctgtct agattgagta aagctgtggc tgagagattc ttcatttcat acatcaatgg 1260 taactctcta gcatccagca actttgtcaa tgtcgttagt aatttccacg attacatgga 1320 gaagtggaag tcctcgggtc tttcttatga tgatctccca gatcttcatg ctgagaattt 1380 gcagttttat gatcacatga taaaatctga tgtgaaaccc gtggtgagcg acacactcaa 1440 tatcgacaga ccggttccag ctactataac gtatcataag aagagtataa cctcccagtt 1500 ctcaccgtta tttacagcgc tatttgagcg cttccagaga tgccttcgag aacgtattat 1560 tcttcctgtt ggtaagattt catcccttga gatggcagga tttgatgtca aaaacaagca 1620 ctgcctcgaa attgatctgt ctaagtttga taagtctcaa ggtgaatttc atttgctaat 1680 tcaggaacat attttgaatg gtctaggatg tccagctccg ataactaagt ggtggtgtga 1740 ttttcaccga ttctcttaca tcagagaccg tagagctggt gttggtatgc ctattagttt 1800 ccagagacga actggtgatg cattcactta ttttggcaat accattgtca ccatggctga 1860 gtttgcctgg tgttatgaca ccgatcaatt cgaaaagctt ttattctcag gcgatgactc 1920 tctaggattt tcacagcttt cccctgttgg tgatccgagt aaattcacga ctctttacaa 1980 catggaagct aaggtgatgg aaccatcagt accatatatc tgttcgaagt tcttactctc 2040 tgacgagttc ggtaacacat tttccgttcc agatccattg cgcgaggttc agcggttagg 2100 aacaaagaaa attccctatt ccgacaatga tgaattcttg tttgctcact tcatgagctt 2160 tgttgatcga ttgaagtttt tggaccgaat gtctcagtcg tgtatcgatc aactttcgat 2220 tttctttgaa ttgaaataca agaagtctgg ggaagaggct gctttaatgt taggcgcctt 2280 taagaaatat accgctaatt tccagtccta caaagaactc tattattcag atcgtcgtca 2340 gtgcgaattg atcaattcgt tttgtagtac agagttcagg gttgagcgta taaattccaa 2400 taaacagcga aagaaacatg gaattgaacg taggcgcgat gacaaacgtc gaactccaac 2460 tggctcgtat ggtggaggcg aagaagcaga gacgaaggtc tcacaagcag aatcgacggg 2520 aacgaggtca caaaagtccc agcgagagag cgcgttcaaa tctcagactg ttccgcttcc 2580 taccgttcta tcaagtggat ggtccggaac tgacagggtc atgccgccat gtgaacgtgg 2640 cggagttacc cgagcctgag gcctctcgtt tagagttatc ggcggaagac catgattttg 2700 acgataccga ttggttcgcc ggtaacgaat gggcggaagg tactttctga acccttcctt 2760 cttctccctc cggtttgtgg cgggagctga gttggcagta ttgctataaa ctgtctgaag 2820 tcactaaaca cattgtggtg aacgggttgt ccatccagct tacggctaaa atggtcagtc 2880 gtagagaaat ctacgccagc aaacttacaa gtttctgagg cacctttgaa accatctcct 2940 aggtttcttc ggaaggactt cggtccgtgt acttctagac aacgtgctag tttcagggta 3000 cgggtgcccc ccactttcgt ggggggcctc caaaaggaga cca 3043 //