ID AB183263; SV 1; linear; genomic RNA; STD; VRL; 2867 BP. XX AC AB183263; XX DT 16-DEC-2010 (Rel. 107, Created) DT 30-MAY-2020 (Rel. 144, Last updated, Version 2) XX DE Brome mosaic virus RNA2, complete sequence. XX KW . XX OS Brome mosaic virus OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; OC Martellivirales; Bromoviridae; Bromovirus. XX RN [1] RP 1-2867 RA Mise K., Goto K., Kaido M., Okuno T.; RT ; RL Submitted (02-JUL-2004) to the INSDC. RL Contact:Kazuyuki Mise Kyoto University, Laboratory of Plant Pathology, RL Graduate School of Agriculture; Kitashirakawa-oiwake-cho, Sakyo-ku, Kyoto RL 606-8502, Japan XX RN [2] RA Goto K., Fujisaki K., Kaido M., Okuno T., Mise K.; RT "Viral factors involved in distinct viral RNA accumulation of two Brome RT mosaic virus isolates in Arabidopsis thaliana protoplasts"; RL Unpublished. XX RN [3] RA De Jong W., Ahlquist P.; RT "Host-specific alterations in viral RNA accumulation and infection spread RT in a brome mosaic virus isolate with an expanded host range"; RL J. Virol. 69:1485-1492(1995). XX DR MD5; f639e75913ce1cc1b4717a369ac222ab. DR RFAM; RF01084; TLS-PK3. DR RFAM; RF01113; BMV3_UPD-PK3. XX FH Key Location/Qualifiers FH FT source 1..2867 FT /organism="Brome mosaic virus" FT /segment="RNA2" FT /strain="M2" FT /mol_type="genomic RNA" FT /note="vector: pB2WD2" FT /db_xref="taxon:12302" FT CDS 104..2572 FT /codon_start=1 FT /transl_table=1 FT /gene="2a" FT /product="2a protein" FT /function="RNA-dependent RNA polymerase" FT /db_xref="GOA:E5RKG7" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR007610" FT /db_xref="InterPro:IPR018228" FT /db_xref="UniProtKB/TrEMBL:E5RKG7" FT /protein_id="BAJ41521.1" FT /translation="MSSKTWDDDFVRQVPSFQWIIDQSLEDEVEAASLQVQEPADGVAI FT DGSLASFKLAIAPLEIGGVFDPPFDRVRWGSICDTVQQMVQQFTDRPLIPQAEMARMLY FT LDIPGSFVLEDEIDDWYPEDTSDGYGVSFAADEDHASDLKLASDSSNCEIEEVRVTGDT FT PKELTLGDRYMGIDEEFQTTNTDYDITLQIMNPIEHRVSRVIDTHCHPDNPDISTGPIY FT MERVSLARTEATSHSILPTHAYFDDSYHQALVENGDYSMDFDRIRLKQSDVDWYRDPDK FT YFQPKMNIGSAQRRVGTQKEVLTALKKRNADVPEMGDAINMKETAKAIAKRFRSTFLNV FT DGEDCLRASMDVMTKCLEYHKKWGKHMDLQGVNVAAETDLRRYQHMLKSDVKPVVTDTL FT HLERAVAATITFHSKGVTSNFSPFFTACFEKLSLALKSRFIVPIGKISSLELKNVRLNN FT RYFLEADLSKFDKSQGELHLEFQREILLALGFPAPLTNWWSDFHRDSYLSDPHAKVGMS FT VSFQRRTGDAFTYFGNTLVTMAMIAYASDLSDCDCAIFSGDDSLIISKVRPVLDTDMFT FT SLFNMEIKVMDPSVPYVCSKFLVETEMGNLVSIPDPMREIQRLAKRKILRDEQMLRAHF FT VSFCDRMKFINQLDEKMITMLCHFVYLKYGKEKPWIFEEVRAALAAFSLYSENFLRFSD FT CYCTEGIRVYQMSDPVCKFKRTMEERKTDGDWFHNWKNPKFPGVLDKVYRTLGIYSSDC FT STKELPVKRIGRLHEALERESLKLANDRRTTQRLKKKVDDYATGRGGLTSVDALLLKSH FT CETFKPSDLR" XX SQ Sequence 2867 BP; 777 A; 600 C; 677 G; 813 T; 0 other; gtaaaccacg gaacgaggtt caatcccttg tcgacccacg gtttgcgcaa cacacatcta 60 accttgttgt tgttgtgttt tgtttctttc tactatcacc aagatgtctt cgaaaacctg 120 ggatgatgat ttcgttcgcc aggtcccgtc tttccaatgg atcatagatc aatccttaga 180 agacgaggtg gaggctgcta gccttcaggt gcaggagccg gcagacggag ttgccattga 240 cggatctctc gcgagtttta aattagctat agcgcccttg gagataggag gggtgttcga 300 tccccctttt gaccgagtgc gctggggctc tatttgcgat accgtccagc aaatggttca 360 acagttcacc gatagaccac tgattcctca ggctgaaatg gcacggatgt tatatcttga 420 cattccgggc tctttcgtgc tcgaagatga aatcgatgac tggtatcctg aggatactag 480 tgatggttac ggtgtatcgt ttgccgccga tgaagatcat gcgagcgatc taaaactcgc 540 cagtgattcc tcaaactgtg aaattgagga agttcgtgtt actggagata cccccaagga 600 gctgaccctt ggagataggt acatgggcat tgacgaagag tttcagacta ccaatactga 660 ttacgacatc actcttcaga tcatgaatcc tattgaacat agggtttcgc gcgtaattga 720 cacgcactgc catccagata accctgacat ctctactggg ccaatttata tggagagagt 780 cagccttgct agaacagaag caaccagtca ttccatactg ccaacccatg cttatttcga 840 tgattcgtac catcaagccc ttgttgaaaa tggtgattat tccatggact ttgataggat 900 cagacttaag caaagtgatg tagactggta cagggacccc gataaatatt ttcaaccaaa 960 aatgaatatc gggagtgctc agcgaagagt tggtactcag aaagaagtct taaccgcact 1020 taaaaagcga aacgcggatg ttccagaaat gggagacgcg attaacatga aggaaactgc 1080 gaaggctata gcaaagcgct ttcgtagcac attccttaat gttgacggtg aagactgtct 1140 gagagcttct atggatgtca tgactaagtg tcttgagtac cataagaagt ggggtaagca 1200 catggacttg caaggtgtga atgtggcagc agagactgat ttacgtcggt accagcatat 1260 gctgaagtct gatgtaaaac ctgttgtaac tgacaccctt cacttggaac gagcagtagc 1320 agctactata acatttcata gtaaaggtgt gactagtaat ttttcaccct ttttcactgc 1380 ttgtttcgag aagttatcat tggccctgaa atccaggttc attgtgccta tcggaaagat 1440 atcctctctg gagcttaaga atgtccgctt gaataacaga tactttcttg aagcggacct 1500 aagcaaattt gataaatctc agggtgagct gcacctagag tttcagagag agatactcct 1560 tgcgctgggc tttccagcgc cgctgacgaa ttggtggtct gattttcatc gcgattctta 1620 tttatcagac cctcatgcca aggtgggaat gtccgtttcc ttccaacgca gaactggtga 1680 tgcgtttaca tatttcggta atactcttgt cactatggct atgattgcat atgcctctga 1740 tctaagtgac tgtgactgtg caatattctc aggagatgat tctttaatca tctctaaagt 1800 tagaccagtc ttggacaccg atatgttcac gtctctcttc aatatggaga taaaagtcat 1860 ggaccctagt gtgccctacg tttgtagtaa gtttcttgtt gaaactgaaa tgggcaattt 1920 ggtgtctata ccagacccta tgagagagat ccagcgctta gctaagcgaa agattctgcg 1980 tgatgaacag atgctcagag cacatttcgt ttccttctgt gatcgaatga agtttattaa 2040 tcaacttgat gagaagatga ttacgatgct ctgtcatttt gtttatctga aatatgggaa 2100 agaaaaacct tggatcttcg aggaggttag agctgctctt gcagcttttt ctttatactc 2160 cgagaatttc ctgaggttct ctgattgcta ctgtaccgaa ggcatcagag tttatcagat 2220 gagcgatcct gtatgtaagt tcaaacgcac tatggaagag cgtaaaactg atggtgactg 2280 gtttcacaac tggaagaatc caaagtttcc tggtgtgtta gacaaagtct acagaaccct 2340 tggaatttat tcctcggact gtagtactaa ggagctccct gtcaaacgga tcggacgttt 2400 acatgaggcc cttgagcgtg agtcactcaa attagcgaat gatcgtagga ccacacaacg 2460 cttgaaaaag aaggtcgacg attacgctac cggtagagga ggcctaacgt cagttgatgc 2520 tttgctcttg aagtcccatt gtgagacttt taagccctct gatctgagat gatcggttct 2580 atatgatata tgaacctaag ctgtgaacag ccctttggtt aaggttaaaa actcctggtc 2640 aggtagacca ctttggctaa gtttaaaagc ttgttgaatc agtacaataa ctgatagtcg 2700 tggttgacac gcagacctct tacaagagcg tctaggtgcc tttgagagtt actctttgct 2760 ctcttcggaa gaacccttag gggttcgtgc atgggcttgc acagcaagtc ttagaatgcg 2820 ggtaccgtac agtgttgaaa aacactgtaa atctctaaaa gagacca 2867 //