ID AB182261; SV 1; circular; genomic DNA; STD; VRL; 2771 BP. XX AC AB182261; XX DT 19-JUN-2004 (Rel. 80, Created) DT 06-JUL-2018 (Rel. 137, Last updated, Version 3) XX DE Honeysuckle yellow vein virus DNA, complete genome, isolate: SP1. XX KW . XX OS Honeysuckle yellow vein virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2771 RA Takanami Y., Were H.K.; RT ; RL Submitted (17-JUN-2004) to the INSDC. RL Contact:Yoichi Takanami Kyushu University, Faculty of Agriculture; RL Hakozaki, Higashi-ku, Fukuoka 812-8581, Japan XX RN [2] RA Were H.K., Takanami Y.; RT "Characterization of honeysuckle-infecting geminiviruses in Japan"; RL Unpublished. XX DR MD5; 0103468611d2c89fe04d94ef25f7c24c. XX FH Key Location/Qualifiers FH FT source 1..2771 FT /organism="Honeysuckle yellow vein virus" FT /isolate="SP1" FT /mol_type="genomic DNA" FT /clone="pHS2" FT /note="Isolate from honeysuckle which commercially sold as FT an ornamental plant in Sapporo, Japan. Honeysuckle's local FT origin is not known." FT /note="originally submitted 'Honeysuckle yellow vein mosaic FT virus'" FT /note="synonym:Honeysuckle-infecting geminivirus" FT /db_xref="taxon:240865" FT CDS 141..491 FT /codon_start=1 FT /transl_table=1 FT /gene="V2" FT /product="V2" FT /db_xref="GOA:Q6I6G4" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q6I6G4" FT /protein_id="BAD23952.1" FT /translation="MWDPLVNDFPETVHGFRCMLTGKYLPLVESTYAPDTVGFDLIRDL FT ILVVRAKNYVEATCRYRDFHSRLQGTSTSELRRPVCQPCECPHCPRHKQKEIVGSKAHV FT SEAQDIQDVQKP" FT CDS 301..1074 FT /codon_start=1 FT /transl_table=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:Q6I6G3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q6I6G3" FT /protein_id="BAD23953.1" FT /translation="MSRRPADIGIFTPAFRARRRLNFDGPYVNRVSVPIAQGTSKKRSW FT AQRPMYRKPRIYRMYRSPDVPKGCEGPCKVQSFEKKDDVGHSGKMLCISDITRGNGLTH FT RVGKRFCIKSVYIIGKIWMDENIKLKNHTNNVIFWLVRDRRPVSVPYGFQEAFNMYENE FT PSTATIKQDLRDRLQVLHKFSGTVTGGQYASKEQAMIKRFWRLNHHVTYNHQEAAKYEN FT HTENALLLYMACTHASNPVYATLKIRVYFYDSVQN" FT CDS complement(1071..1478) FT /codon_start=1 FT /transl_table=1 FT /gene="C3" FT /product="replication enhancer protein" FT /db_xref="GOA:Q6I6G2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q6I6G2" FT /protein_id="BAD23954.1" FT /translation="MDSRTGDTITAAQAWNGAYIWTVPNPLYFKITSHAQRPFNMDQDI FT ITIQIQFNHNLRSQLGLHKCFLTFKLWTHLQPLTSYFLNVFRKRVLEYLDNLGVISINN FT VIRGRLIMYCTMYSRGTESVQQFTDIKFKLY" FT CDS complement(1219..1626) FT /codon_start=1 FT /transl_table=1 FT /gene="C2" FT /product="transcriptional trans-activator protein" FT /db_xref="GOA:Q6I6G1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q6I6G1" FT /protein_id="BAD23955.1" FT /translation="MRPSSPSTAHSTQVPIKVQHRLGKKRAPRRRRIDLNCGCSIYVAL FT GCANNGFTHRGHHHCSSGMEWRVYLDSAKSPIFQNHEPRSTAIQHGPGHNNDTDPIQPQ FT PEVSTGSTQVLPDLQALDSLTTSDLLFLECV" FT CDS complement(1526..2617) FT /codon_start=1 FT /transl_table=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:Q6I6G0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q6I6G0" FT /protein_id="BAD23956.1" FT /translation="MPRAGRFSLKAKNYFLTYPHCSIDKEEALTQLQNLNTPTNILFIR FT ICRELHQNGSPHLHVLIQFEGKYNCTNQRFFDLVSPNRSAHFHPNIQAAKSSSDVKTYM FT EKDGDIRDFGVFQVDGRSARGGCQSANDAYAEAINSGSKSSALCILREKAPKDFVLQFH FT NLNSNLDRIFAPPLEEFVSPFLSSSFDQVPEQLEEWAAENVRDSAARPWRPISIVIEGD FT SRTGKTMWARSLSPRHNHLCGHLDLSPKVYSNEAWYNVIDDVDPHYLKHFKEFMGAQRD FT WQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYTEYLDEDKNAALKAWAVKNASFVTLYGP FT LYSGSHQGSAQIREEESTSQAED" FT CDS complement(2167..2460) FT /codon_start=1 FT /transl_table=1 FT /gene="C4" FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q6I6F9" FT /protein_id="BAD23957.1" FT /translation="MGALISMSSSSSRGNTTAQINDSSTSYPQTGQHISIQTFRRLKAR FT QMSRPIWRKTETFVILECSRSMEDQLEEVASLPTTRMPRQSTQDLSHRHSVY" XX SQ Sequence 2771 BP; 715 A; 564 C; 671 G; 821 T; 0 other; acccggatgg gccgcccgaa atttcgtggg tggtcccccc cttgtcggcc aatgaataac 60 gtgccttgaa tgttagataa gtggaaagtg acgtttgctt ttgtctttat atacgtcagc 120 cctaatttta acggtgtaag atgtgggatc ctttagttaa cgatttccct gaaaccgttc 180 acggttttag gtgtatgtta acgggtaaat acctccccct tgttgaatct acgtatgctc 240 cggatacggt gggtttcgat ttgatacgtg atcttatact cgttgttcgt gcgaagaatt 300 atgtcgaggc gacctgcaga tatagggatt ttcactcccg ccttcagggc acgtcgacgt 360 ctgaacttcg acggcccgta tgtcaaccgt gtgagtgtcc ccattgccca aggcacaagc 420 aaaaagagat cgtgggctca aaggcccatg tatcggaagc ccaggatata caggatgtac 480 agaagccctg atgtaccgaa ggggtgtgaa ggtccgtgta aggtccagtc tttcgagaag 540 aaagatgatg ttggtcactc tggtaaaatg ttatgtatct ccgatattac tcgtggtaat 600 ggacttactc atcgtgtggg taagagattt tgtataaaat ctgtctatat cattggaaag 660 atatggatgg atgagaacat taagctcaag aatcacacta ataacgtgat cttctggctt 720 gtcagagata ggcgccctgt gtccgttcct tatgggttcc aagaggcgtt taatatgtat 780 gaaaatgaac ctagtacagc tacgatcaag caggatctga gagatcgctt gcaggtgtta 840 cacaagtttt ctggtacggt tacaggtgga caatatgcgt ctaaggaaca agctatgatc 900 aagcgtttct ggaggttgaa tcatcatgtc acttataatc accaggaggc tgctaaatat 960 gagaaccata ctgaaaatgc attattattg tatatggctt gtactcatgc cagtaatcca 1020 gtgtatgcta cattaaaaat cagagtgtat ttctacgatt cagtacaaaa ttaataaagc 1080 ttgaatttta tatcagtaaa ttgttgtaca gattcagttc ctctcgaata catcgtacaa 1140 tacatgatca accgccctct aattacattg ttaattgaaa taacacccaa attatctaaa 1200 tactctaata cacgtttcct aaacacattc aagaaatagg aggtcagagg ttgtaagtga 1260 gtccagagct tgaaggtcag gaagcacttg tgtagaccca gttgagacct caggttgtgg 1320 ttgaattgga tctgtatcgt tattatgtcc tggtccatgt tgaatggccg ttgagcgtgg 1380 ctcgtgattt tgaaatatag gggatttggc actgtccaga tatacgcgcc attccatgcc 1440 tgagctgcag tgatggtgtc ccctgtgcgt gaatccattg ttagcacaac ctaatgcgac 1500 gtaaatagaa cacccgcagt ttagatcaat cctccgcctg cgaggtgctc tcttcttccc 1560 taatctgtgc tgaaccttga tgggaacctg agtagagtgg gccgtagagg gtgacgaagg 1620 acgcattttt tactgcccat gcttttagtg cggcgttctt gtcctcatct aaatactcgg 1680 tgtatgatga cgttgggcct ggattgcaga ggaagattgt tgggatacca cctttaattt 1740 gaattggttt cccgtacttg gtgttgcttt gccagtccct ttgggccccc atgaactctt 1800 taaagtgctt taggtagtgg ggatccacgt catcaatgac gttgtaccag gcctcgttgc 1860 tgtaaacctt ggggcttaag tcaagatggc cgcaaaggtg gttatgacgt ggactcagag 1920 acctggccca catggtcttc cctgtcctgc tatccccttc tatcacaatg ctaatgggcc 1980 tccatggccg cgcagcggaa tccctgacgt tctcggcagc ccattcctca agttgctctg 2040 gaacttgatc aaatgaagaa gataaaaaag gagaaacaaa ttcctccaac ggaggagcaa 2100 aaatcctatc taaattgcta tttaaattat gaaattgtaa aacaaaatct ttgggagctt 2160 tctcccttaa tatacagagt gccgatgact tagatcctga gttgattgcc tcggcatacg 2220 cgtcgttggc agactggcaa cctcctctag ctgatcttcc atcgacctgg aacactccaa 2280 aatcacgaat gtctccgtct ttctccatat aggtcttgac atctgacgag cttttagccg 2340 cctgaatgtt tggatggaaa tgtgctgacc tgtttgggga tacgaggtcg aagaatcgtt 2400 gatttgtgca gttgtatttc ccctcgaact ggatgaggac atggagatga gggctcccat 2460 tttgatgtag ctctctgcag atccttatga acagaatgtt ggttggtgtg tttaaatttt 2520 gtaattgggt tagggcttct tctttgtcga tggagcagtg tgggtatgtg aggaaataat 2580 ttttggcttt taaagagaaa cgcccagctc taggcatgtt agacttggtc aattgggggg 2640 cacttcaaac tcctgctgaa tgggggggca ttggggggca atttatattc tggggggcat 2700 ggcattattg taattacttt aattttaaat tcaaaattca aattggtaaa cgcggccatc 2760 cgtataatat t 2771 //