ID   AB181354; SV 1; linear; genomic RNA; STD; VRL; 1574 BP.
XX
AC   AB181354;
XX
DT   14-JUN-2004 (Rel. 80, Created)
DT   14-JUN-2004 (Rel. 80, Last updated, Version 1)
XX
DE   Japanese hornwort mosaic virus gene for polyprotein, partial cds,
DE   isolate:JHMV-FK2.
XX
KW   .
XX
OS   Japanese hornwort mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1574
RA   Yamashita K., Fukui Y.;
RT   ;
RL   Submitted (08-JUN-2004) to the INSDC.
RL   Kazuo Yamashita, Aomori Field Crops and Horticultural Research Center; 91
RL   Yanagisawa, Inuotose, Rokunohe, Aomori 033-0071, Japan
RL   (E-mail:kazuo_yamashita@ags.pref.aomori.jp, Tel:81-176-53-7631,
RL   Fax:81-176-53-8934)
XX
RN   [2]
RA   Yamashita K., Fukui Y.;
RT   "Japanese hornwort mosaic virus isolate from Water dropwort, polyprotein
RT   partial cds.";
RL   Unpublished.
XX
DR   MD5; c1f5d93633abceeac9c277fcf5f73f85.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1574
FT                   /organism="Japanese hornwort mosaic virus"
FT                   /isolate="JHMV-FK2"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Aomori, Fukuchi"
FT                   /db_xref="taxon:189819"
FT   CDS             <1..1450
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q6L5M8"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q6L5M8"
FT                   /protein_id="BAD22826.1"
FT                   /translation="STVVDNTLMVLTAMYYSLLRSGVSLKEHANTIQFFINGDDLIIAV
FT                   EPSAQNLLDVMASHFSELGLNYDFSSRSTKKEDLWFMSHKGVKREGIFIPKLEEERIIS
FT                   ILEWDRSTEPSHRLEAICAAMIEAWGYDWLVHEIRLFYSWVLEQYPYNQLAEQGKAPYI
FT                   AETALHKLYLDRDADEEELLKYIIEQSFEWPQEEHVYHQNGEEEKDEDKNLDAGMQPPK
FT                   KDKGKEPESSNTQDDNRLVQTNRDRDIDMGTSGTFAVPRYKIFKSKLRFPVVRGRKIMN
FT                   MAHLAQYNPEQTDLANTRATQNQFARWFDGIKGDYGLNDAEMDVMLNGLVVWCIENGTS
FT                   PNINGLWTMMDGEEQIEYPIKPLIDHASPTFRQIMAHFSDIAEAYIEKRNFDGKYMPRY
FT                   GLLRNLNDFSLARYAFDFYEMTSKTPNRAREAHLQMKAAALRSANTRMFGLDGKVTTKE
FT                   EDTERHTAEDVKRDLHTLMGVRAI"
FT   mat_peptide     <1..607
FT                   /product="NIb"
FT   mat_peptide     608..1447
FT                   /product="coat protein"
XX
SQ   Sequence 1574 BP; 501 A; 301 C; 388 G; 384 T; 0 other;
     gtcaactgtc gtcgataaca cgcttatggt attgacagca atgtactact ccttattgag        60
     gtctggcgtt tcattaaaag agcatgcaaa cacgatacag ttctttatta atggtgatga       120
     tctcataatt gctgtggagc caagtgcaca aaaccttcta gacgtgatgg catcacactt       180
     ctcagagtta gggctaaatt acgacttttc ttcaaggtca accaagaagg aagatctctg       240
     gtttatgtct cacaaaggtg ttaaaagaga agggattttc ataccaaagc tggaggaaga       300
     gcgcataata tcaatcttag agtgggacag atcaacggaa ccatcacaca ggcttgaggc       360
     catatgcgca gctatgatcg aggcatgggg atacgactgg ttggtacatg aaattcggct       420
     cttctatagc tgggtgttag agcagtatcc atacaatcaa ttggcagaac aaggcaaggc       480
     tccatacata gcggaaacag cattacacaa attgtattta gatcgtgatg ctgatgaaga       540
     ggaactattg aagtacatta tagagcagag ttttgaatgg ccacaagaag agcacgtata       600
     ccaccagaat ggagaggagg agaaagacga ggacaaaaat ttggatgctg gcatgcagcc       660
     tccaaagaag gacaaaggga aggaacctga gtcatccaac acacaggatg ataacaggtt       720
     agtgcagaca aacagagaca gggatattga catgggcaca agcgggactt tcgctgtgcc       780
     gaggtataag atcttcaaat ctaaactgag gtttccggtg gtgagaggaa ggaaaataat       840
     gaacatggcc catcttgctc agtacaaccc agaacaaaca gacctagcaa acactagggc       900
     aactcaaaat caatttgcac gttggtttga tggaattaaa ggggattatg gtttaaatga       960
     cgcagagatg gatgttatgc taaatggtct cgtagtttgg tgcatcgaga atgggacttc      1020
     cccaaatata aacggattgt ggactatgat ggatggagaa gagcaaatcg aatatccaat      1080
     caaaccatta atagatcatg cgtcacccac attccgacag attatggcgc attttagtga      1140
     cattgccgag gcgtatatag aaaagcgtaa ctttgatgga aagtatatgc cacggtacgg      1200
     tttactccga aacttgaacg actttagtct tgcaagatat gcatttgatt tctatgaaat      1260
     gacatccaag acacccaaca gggcaagaga ggctcacttg cagatgaaag cagccgccct      1320
     gcgcagcgcg aacacgcgta tgtttggttt agacgggaaa gttacaacaa aggaagagga      1380
     cacagagaga catacagctg aagatgtgaa gcgtgactta cacactctta tgggtgtgcg      1440
     cgctatctaa tcaaagtttc tctggacgag cctgccttcg tattatagca tcgtataata      1500
     atcgtgctta tctgccgtgc ctttcctttt agtgagtgct tcactcgtgg cgagtcatgt      1560
     cttttaagta ggag                                                        1574
//