ID   AB181353; SV 1; linear; genomic RNA; STD; VRL; 1574 BP.
XX
AC   AB181353;
XX
DT   14-JUN-2004 (Rel. 80, Created)
DT   21-JUN-2008 (Rel. 96, Last updated, Version 2)
XX
DE   Japanese hornwort mosaic virus gene for polyprotein, partial cds,
DE   isolate:JHMV-FK1.
XX
KW   .
XX
OS   Japanese hornwort mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1574
RA   Yamashita K., Fukui Y.;
RT   ;
RL   Submitted (08-JUN-2004) to the INSDC.
RL   Contact:Kazuo Yamashita Aomori Field Crops and Horticultural Research
RL   Center; 91 Yanagisawa, Inuotose, Rokunohe, Aomori 033-0071, Japan
XX
RN   [2]
RA   Yamashita K., Fukui Y.;
RT   "Japanese hornwort mosaic virus isolate from Water dropwort, polyprotein
RT   partial cds.";
RL   Unpublished.
XX
DR   MD5; 20cefbb761917c5bd63e83dd0ad61a35.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1574
FT                   /organism="Japanese hornwort mosaic virus"
FT                   /isolate="JHMV-FK1"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Aomori, Fukuchi"
FT                   /db_xref="taxon:189819"
FT   CDS             <1..1450
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q6L5M9"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q6L5M9"
FT                   /protein_id="BAD22825.1"
FT                   /translation="STVVDNTLMVLTAMYYSLLRSGISLKEHTNIIQFFINGDDLIIAV
FT                   EPNAQNLLDVMASHFSELGLNYDFTSRSTKKEDLWFMSHKGVRREGIFIPKLEEERIIS
FT                   ILEWDRSTEPSHRLEAICAAMIEAWGYDWLVHEIRLFYSWVLEQYPYNQLAEQGKAPYI
FT                   AETALHKLYLDRDANEEELLKYIVDQSFEWPQEEHVYHQNGEEKEDEDKSLDAGVQPPK
FT                   KDKGKEPESSNTQDDNKLVQMNRDRDIDMGTSGTFAVPRYKIFKSKLRFPAVRGRKIMN
FT                   MAHLAQYNPEQTDLANTRATQNQFARWFDGVKGDYGLNDAEMDVMLNGLVVWCIENGTS
FT                   PNINGLWTMMDGEEQIEYPIKPLIDHASPTFRQIMAHFSDIAEAYIEKRNFDGKYMPRY
FT                   GLLRNLNDFSLARYAFDFYEMTSKTPNRAREAHLQMKAAALRSANTRMFGLDGKVTTKE
FT                   EDTERHTAEDVKRDLHTLMGVRAI"
FT   mat_peptide     <1..607
FT                   /product="NIb"
FT   mat_peptide     608..1447
FT                   /product="coat protein"
XX
SQ   Sequence 1574 BP; 507 A; 302 C; 377 G; 388 T; 0 other;
     atcaaccgtt gttgacaaca cgctcatggt attaacagca atgtattatt ccttgttgcg        60
     atcaggcatc tcattgaaag aacacacaaa tatcatacaa ttctttatca atggtgatga       120
     tcttattatc gctgtagagc caaacgcaca aaatctttta gatgtgatgg catcgcactt       180
     ctcagaattg ggactgaact acgattttac ttcaagatcg acaaagaaag aagacctttg       240
     gttcatgtct cataaaggtg tcaggagaga aggtattttt ataccgaaat tagaagagga       300
     gcgcataata tcaattctag agtgggatag atcaacggaa ccatctcaca gactcgaggc       360
     tatatgcgcg gcaatgattg aagcatgggg ttatgattgg ctggtgcacg aaattcgact       420
     cttctatagt tgggtgcttg aacaataccc atacaaccaa ctagcagagc aaggtaaggc       480
     tccatatata gcagaaacag cattgcataa gctatactta gaccgtgatg caaatgaaga       540
     ggaattactt aaatacatcg tggaccagag ctttgaatgg ccacaagaag agcacgtgta       600
     ccatcaaaac ggagaggaga aggaggatga agataagagt ctggacgctg gtgtgcaacc       660
     gccaaagaag gataaaggaa aggaacctga atcatccaac acgcaagatg ataataagct       720
     agttcagatg aacagggaca gggatattga catgggcaca agcggaactt ttgctgtgcc       780
     aagatacaaa attttcaaat ccaagttgag atttccagca gtgcggggaa gaaaaatcat       840
     gaatatggcc caccttgctc agtacaatcc agagcaaaca gatctggcaa atactagggc       900
     tacacagaat caattcgcac gttggtttga tggagtcaag ggagactacg gactgaatga       960
     tgcagaaatg gatgttatgc tgaatggtct tgttgtctgg tgcatcgaga acggaacttc      1020
     cccaaatata aatggattgt ggactatgat ggatggagag gagcaaattg aatatccaat      1080
     caaaccatta atagatcatg cgtcacccac attccgacaa attatggcgc attttagtga      1140
     cattgccgag gcgtatatag agaagcgaaa cttcgatgga aagtatatgc cacggtacgg      1200
     tttacttcga aacttgaacg acttcagtct tgcgaggtat gcatttgatt tctatgaaat      1260
     gacatccaag acacccaaca gggcaagaga ggctcacttg cagatgaaag cagccgccct      1320
     gcgcagcgcg aatacgcgta tgtttggttt agacgggaaa gtaacaacaa aggaagagga      1380
     cacagagaga catacagctg aagatgtgaa gcgtgattta cacactctca tgggtgtgcg      1440
     cgctatttaa tcaaagtttc cctggacgag cctgccttcg tattatagca tcgtataata      1500
     ttcgtgctta tctgccgtgc ctttcctttt agtgagtgct tcactcgtgg cgagtcatgt      1560
     cttttaagta ggag                                                        1574
//