ID   AB181352; SV 1; linear; genomic RNA; STD; VRL; 1574 BP.
XX
AC   AB181352;
XX
DT   14-JUN-2004 (Rel. 80, Created)
DT   30-JAN-2009 (Rel. 99, Last updated, Version 3)
XX
DE   Japanese hornwort mosaic virus gene for polyprotein, partial cds, isolate:
DE   JHMV-IW.
XX
KW   .
XX
OS   Japanese hornwort mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1574
RA   Yamashita K., Fukui Y.;
RT   ;
RL   Submitted (08-JUN-2004) to the INSDC.
RL   Contact:Kazuo Yamashita Aomori Field Crops and Horticultural Research
RL   Center; 91 Yanagisawa, Inuotose, Rokunohe, Aomori 033-0071, Japan
XX
RN   [2]
RA   Yamashita K., Fukui Y.;
RT   "Japanese hornwort mosaic virus isolate from Water dropwort, polyprotein
RT   partial cds.";
RL   Unpublished.
XX
DR   MD5; 4228f48f4847f8d91dabe2967cc1ad49.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1574
FT                   /organism="Japanese hornwort mosaic virus"
FT                   /isolate="JHMV-IW"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Aomori, Iwaki"
FT                   /isolation_source="Water Dropwort"
FT                   /db_xref="taxon:189819"
FT   CDS             <1..1450
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q6L5N0"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q6L5N0"
FT                   /protein_id="BAD22824.1"
FT                   /translation="STVVDNTLMVLTAMYYSLLRSGVSLEGHTNIIQFFINGDDLIIAV
FT                   EPSAQNLLDVMASHFSELGLNYDFTSRSTRKEDLWFMSHKGVKREGIFIPKLEEERIIS
FT                   ILEWDRSTEPSHRLEAICAAMIEAWGYDWLVHEIRLFYSWVLEQYPYNQLAEQGKAPYI
FT                   AETALHKLYLDRDANEEELLKYIIEQNFEWPQEEHVYHQNGEEEKDEDKNLDAGMQPPK
FT                   KDKGKEPESSNTQDDNRLVQANRDRDIDMGTSGTFAVPRYKIFKSKLRFPVVRGRKIMN
FT                   MAHLAQYNPEQTDLANTRATQNQFARWFDGIKGDYGLNDAEMDVMLNGLVVWCIENGTS
FT                   PNINGLWTMMDGEEQIEYSIKPLIDHASPTFRQIMAHFSDIAEAYIEKRNFDGKYMPRY
FT                   GLLRNLNDFSLARYAFDFYEMTSKTPNRAREAHLQMKAAALRSANTRMFGLDGKVTTKE
FT                   EDTERHTAEDVKRDLHTLMGVRAI"
FT   mat_peptide     <1..607
FT                   /product="NIb"
FT   mat_peptide     608..1447
FT                   /product="coat protein"
FT   3'UTR           1451..1574
XX
SQ   Sequence 1574 BP; 499 A; 305 C; 389 G; 381 T; 0 other;
     atcaacagtt gtcgacaaca cgctcatggt gttaacagca atgtactatt ccttgctgag        60
     atcgggtgtt tcattggaag ggcacacaaa cattatacag ttcttcatta atggtgatga       120
     cctcattatt gctgtggagc caagtgcaca gaaccttctg gacgtgatgg catcacattt       180
     ttcggaattg gggctgaatt atgatttcac ttcaagatca acaagaaagg aagatctttg       240
     gtttatgtct cataaaggtg tcaagaggga agggatcttc ataccaaagc tggaggagga       300
     gcgtataata tcaattttgg aatgggatag atcaacggaa ccatctcata ggctcgaagc       360
     tatatgcgca gctatgattg aagcatgggg ttatgattgg ctagtgcatg aaatccgact       420
     tttctatagc tgggtactag aacagtatcc gtataatcag ttggcagaac agggtaaagc       480
     tccatacata gcggaaacag cattacacaa attgtatttg gatcgtgatg ccaatgagga       540
     agagctattg aagtacatca tagagcagaa ttttgaatgg ccacaagaag agcacgtgta       600
     ccatcaaaac ggagaagaag agaaggatga ggacaaaaac ttggacgctg gcatgcaacc       660
     accaaagaag gacaaaggaa aagagcctga atcctccaac acacaggatg acaatagact       720
     agtgcaagca aatagagata gagacatcga catgggcaca agtgggactt ttgctgtacc       780
     gaggtacaag atcttcaagt ctaaactcag attcccagta gtgcgaggac ggaaaataat       840
     gaacatggct caccttgcgc agtataaccc agagcaaaca gacctagcaa acactagagc       900
     aacacagaat cagttcgcac gctggtttga tggcatcaaa ggggattatg ggctgaatga       960
     cgcagagatg gatgttatgc taaatggtct cgttgtttgg tgcattgaga atgggacatc      1020
     cccgaatata aacggattgt ggactatgat ggatggagaa gaacaaattg aatattcaat      1080
     caaaccatta atagatcatg cgtcacccac attccgacag attatggcgc attttagtga      1140
     cattgccgag gcgtatatag aaaagcgtaa ctttgatgga aagtatatgc cacggtacgg      1200
     tttactccga aacttgaacg acttcagtct tgcgagatat gcatttgatt tctatgaaat      1260
     gacatccaag acacccaaca gggcaagaga ggctcacttg cagatgaaag cagccgccct      1320
     gcgcagcgcg aatacgcgca tgtttggttt agacggaaaa gttacaacaa aggaagagga      1380
     cacggagaga catacagctg aagacgtgaa gcgtgatcta cacaccctta tgggtgtgcg      1440
     cgccatctag tcaaagtttc tctggacgag cctgccttcg tattatagca tcgtataata      1500
     atcgtgctta tctgccgtgc ctttcctttt agtgagtgct tcactcgtgg cgagtcatgt      1560
     cttttaagta ggag                                                        1574
//