ID   AB180034; SV 1; linear; genomic RNA; STD; VRL; 1076 BP.
XX
AC   AB180034;
XX
DT   25-MAY-2004 (Rel. 79, Created)
DT   20-AUG-2004 (Rel. 80, Last updated, Version 2)
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DE   Turnip mosaic virus gene for polyprotein, partial cds.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1076
RA   Ohshima K.;
RT   ;
RL   Submitted (18-MAY-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1099/vir.0.80124-0.
RX   PUBMED; 15302962.
RA   Tan Z., Wada Y., Chen J., Ohshima K.;
RT   "Inter- and intralineage recombinants are common in natural populations of
RT   Turnip mosaic virus";
RL   J. Gen. Virol. 85(Pt 9):2683-2696(2004).
XX
DR   MD5; e732c12cc057634763d52878817d51f2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1076
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="SD3J"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..867
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q6L685"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q6L685"
FT                   /protein_id="BAD20448.1"
FT                   /translation="AGETLDAGLTEEQKQAEKERKERERSEKERERQRQLALKKGKNAA
FT                   QEEGERDNEVNAGTSGTFSVPRLKSLTSKMRVPKYEKRVALNLDHLIFYTPEQTDLSNT
FT                   RSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSPNINGMWVMMDGDDQVE
FT                   FPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFD
FT                   FYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHTTEDVNRNMHN
FT                   LLGVKGL"
FT   mat_peptide     <1..864
FT                   /gene="CP"
FT                   /product="CP protein"
XX
SQ   Sequence 1076 BP; 333 A; 212 C; 278 G; 253 T; 0 other;
     gcaggtgaga cgcttgatgc tggtctaaca gaagagcaga agcaggctga aaaggagaga        60
     aaggagagag agagatcaga gaaagagcga gaaaggcaaa ggcagctagc gctcaagaaa       120
     ggcaaaaacg cagcacaaga agagggcgaa cgtgacaatg aagtaaacgc cggaacttcc       180
     ggaactttca gcgtgcctag actcaaaagt cttacaagca aaatgcgtgt gccgaagtat       240
     gagaaaagag ttgcccttaa cctcgatcat ttgatctttt acacgccgga gcagacagat       300
     ttatccaaca cgcgttcaac gcggaagcag tttgacactt ggtttgaagg tgtcatggct       360
     gactatgagc taacggagga caaaatgcaa atcattctca atggtttaat ggtctggtgc       420
     attgagaacg gaacctcccc gaacataaac ggaatgtggg tgatgatgga cggcgatgat       480
     caggtggaat tcccgatcaa accgctcatt gaccacgcca aacccacatt taggcagata       540
     atggcccatt tcagtgacgt agctgaagcg tacattgaaa agcgtaacca agaccgacca       600
     tacatgccac gatatggtct tcagcgcaat ttaaccgaca tgagcttagc tcgatacgcg       660
     tttgatttct atgaaatgac ttctagaact ccaatacgtg cgagagaagc acacatccag       720
     atgaaagcag cagcactgcg tggcgcaaat aataatttgt tcggcttgga tggtaacgtc       780
     ggcacaacgg tagagaacac ggaaaggcat acgaccgagg acgttaatcg gaacatgcat       840
     aacttacttg gcgttaaggg gttatgaagt tgtatgctag tagactataa gtagttaagt       900
     ttactcgtta gtattctcgc ttatgggaaa tatgtaagtt tgttaaagca gccagtgtga       960
     cttcgtcatg tgtgttgttg ttactttcta tattttcgcc gaacttttta ttggtgttag      1020
     cgcatgtggt gagatactat ctcgattgcc ttaacatttg ataggaagcc agggac          1076
//