ID   AB180008; SV 1; linear; genomic RNA; STD; VRL; 1076 BP.
XX
AC   AB180008;
XX
DT   25-MAY-2004 (Rel. 79, Created)
DT   20-AUG-2004 (Rel. 80, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1076
RA   Ohshima K.;
RT   ;
RL   Submitted (18-MAY-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1099/vir.0.80124-0.
RX   PUBMED; 15302962.
RA   Tan Z., Wada Y., Chen J., Ohshima K.;
RT   "Inter- and intralineage recombinants are common in natural populations of
RT   Turnip mosaic virus";
RL   J. Gen. Virol. 85(Pt 9):2683-2696(2004).
XX
DR   MD5; 03eca10a8d5b53c773c4fa1ef12a9f12.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1076
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="CHSE1"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..867
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q6L6B1"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q6L6B1"
FT                   /protein_id="BAD20422.1"
FT                   /translation="AGETLDAGLTEEQKQAEKEKKEREKTEKERERQKQLALKKGKNVA
FT                   QEEGERDKEVNAGTSGTFSVPRLKSLTSKMRVPRYEQRVALNLDHLILYTPEQTDLSNT
FT                   RSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSPNINGMWVMMDGDDQVE
FT                   FPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFD
FT                   FYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHTTEDVNRNMHN
FT                   LLGVKGL"
FT   mat_peptide     <1..864
FT                   /gene="CP"
FT                   /product="CP protein"
XX
SQ   Sequence 1076 BP; 340 A; 212 C; 281 G; 243 T; 0 other;
     gcaggtgaga cgcttgatgc aggtttgaca gaggaacaaa agcaggcgga gaaggagaag        60
     aaagagagag agaagacaga aaaggaacga gagaggcaaa aacagttggc actcaagaaa       120
     ggcaagaatg ttgcacaaga agagggagaa cgcgacaagg aagtaaacgc tggaacctct       180
     ggaactttca gtgtacccag actcaagagt ctgacaagca agatgcgcgt gccaagatac       240
     gagcaaagag tggctctaaa cctcgatcac ctaatcctat acacgccaga gcagacggat       300
     ctatccaaca cacgttcaac gcgaaagcag tttgacacat ggtttgaagg tgtaatggct       360
     gactacgaac tgacggagga caaaatgcaa atcattctca atggtttaat ggtctggtgc       420
     attgagaacg gaacctcccc gaacataaac ggaatgtggg tgatgatgga cggcgatgat       480
     caggtggaat tcccgatcaa accgctcatt gaccacgcca aacccacatt taggcagata       540
     atggcccatt tcagtgacgt agctgaagcg tacattgaaa agcgtaacca agaccgacca       600
     tacatgccac gatatggtct tcagcgcaat ttaaccgaca tgagcttagc tcgatacgcg       660
     tttgatttct atgaaatgac ttctagaact ccaatacgtg cgagagaagc acacatccag       720
     atgaaagcag cagcactgcg tggcgcaaat aacaatttgt tcggcttgga tggaaacgtt       780
     ggtacaacgg tagagaacac ggagaggcat acgaccgagg acgttaatcg gaacatgcat       840
     aacctacttg gcgttaaggg gttatgaagt tgtgtgctgg tagactataa gtatttaagt       900
     ttactcgtta gtattctcgc ttatgggaaa tatgtaagtt tgttaaagca gccagtgtga       960
     ctttgtcatg tgtgttgttg ttactttcta tattttcgcc gaacatttta ttggtgttag      1020
     cgcatgtggt gaggatcatc ctcgattgcc ttaacatttg ataggatgca agggac          1076
//