ID   AB179998; SV 1; linear; genomic RNA; STD; VRL; 1076 BP.
XX
AC   AB179998;
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DT   25-MAY-2004 (Rel. 79, Created)
DT   20-AUG-2004 (Rel. 80, Last updated, Version 2)
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DE   Turnip mosaic virus gene for polyprotein, partial cds.
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KW   .
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OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
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RN   [1]
RP   1-1076
RA   Ohshima K.;
RT   ;
RL   Submitted (18-MAY-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1099/vir.0.80124-0.
RX   PUBMED; 15302962.
RA   Tan Z., Wada Y., Chen J., Ohshima K.;
RT   "Inter- and intralineage recombinants are common in natural populations of
RT   Turnip mosaic virus";
RL   J. Gen. Virol. 85(Pt 9):2683-2696(2004).
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DR   MD5; 591793bb10790c114b46864d52aafc83.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1076
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="CHK16"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..867
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q6L6C1"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q6L6C1"
FT                   /protein_id="BAD20412.1"
FT                   /translation="AGETLDAGLTEEQKQAEKERKERERSEKERERQKQLALKKGKNTA
FT                   QEEGERDNEVNAGTSGTFSVPRLKSLTSKMRVPKYEKRVALNLDHLILYTPEQTDLSNT
FT                   RSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSPNINGMWVMMDGDDQVE
FT                   FPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFD
FT                   FYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHTTEDVNRNMHN
FT                   LLGVKGL"
FT   mat_peptide     <1..864
FT                   /gene="CP"
FT                   /product="CP protein"
XX
SQ   Sequence 1076 BP; 338 A; 211 C; 276 G; 251 T; 0 other;
     gcaggtgaga cgcttgatgc cggtctaaca gaagagcaga agcaggctga aaaggagaga        60
     aaggagagag agagatcaga gaaagagcga gaaaggcaaa aacagctagc gcttaagaaa       120
     ggcaaaaaca cagcacaaga agaaggcgaa cgtgacaatg aggtaaacgc cggaacttcc       180
     ggaactttta gcgtgcccag actcaaaagc cttacaagca aaatgcgtgt gccgaagtat       240
     gagaaaagag ttgccctcaa cctcgatcat ttgatcttat acacgccgga gcagacagat       300
     ttatccaaca cgcgttcaac gcggaagcag tttgatactt ggtttgaagg tgtcatggct       360
     gactatgagc taacggagga taaaatgcaa atcattctca atggtttaat ggtctggtgc       420
     attgagaacg gaacctcccc gaacataaac ggaatgtggg tgatgatgga cggcgatgat       480
     caggtggaat tcccgatcaa accgctcatt gaccacgcca aacccacatt taggcagata       540
     atggcccatt tcagtgacgt agctgaagcg tacattgaaa agcgtaacca agaccgacca       600
     tacatgccac gatatggtct tcagcgcaat ttaaccgaca tgagcttagc tcgatacgca       660
     tttgatttct atgaaatgac ttctagaact ccaatacgtg cgagagaagc acacatccag       720
     atgaaagcag cagcactgcg tggcgcaaat aacaatttgt tcggcttgga tggaaacgtt       780
     ggtacaacgg tagagaacac ggagaggcat acgaccgagg acgttaatcg gaacatgcat       840
     aacttacttg gcgttaaggg gttatgaagt tgtatgctgg tagactataa gtatttaagt       900
     ttactcgtta gtattctcgc ttatgggaaa tatgtaagtt tgttaaagca gccagtgtga       960
     cttcgtcatg tgtgttgttg ttactttcta tattttcgcc gaacatttta ttggtgttag      1020
     cgcatgtggt gaggatcatc ctcgattgcc ttaacatttg ataggaagca agggac          1076
//