ID   AB179995; SV 1; linear; genomic RNA; STD; VRL; 1076 BP.
XX
AC   AB179995;
XX
DT   25-MAY-2004 (Rel. 79, Created)
DT   20-AUG-2004 (Rel. 80, Last updated, Version 2)
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DE   Turnip mosaic virus gene for polyprotein, partial cds.
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KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1076
RA   Ohshima K.;
RT   ;
RL   Submitted (18-MAY-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1099/vir.0.80124-0.
RX   PUBMED; 15302962.
RA   Tan Z., Wada Y., Chen J., Ohshima K.;
RT   "Inter- and intralineage recombinants are common in natural populations of
RT   Turnip mosaic virus";
RL   J. Gen. Virol. 85(Pt 9):2683-2696(2004).
XX
DR   MD5; 5039d0a485796646c8956b3ab5f64b02.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1076
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="CHHH29"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..867
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q6L6C4"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q6L6C4"
FT                   /protein_id="BAD20409.1"
FT                   /translation="AGETLDAGLTDEQKQAEKEKKEKEKAEKERERQKQLALKKGKDVA
FT                   QEEGKRDKEVNAGTSGTFSVPRLKSLTSKMRVPRYEQRVALNLDHLILYTPEQTDLSNT
FT                   RSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSPNINGMWVMMDGDDQVE
FT                   FPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFD
FT                   FYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHTTEDVNRNMHN
FT                   LLGVKGL"
FT   mat_peptide     <1..864
FT                   /gene="CP"
FT                   /product="CP protein"
XX
SQ   Sequence 1076 BP; 336 A; 216 C; 282 G; 242 T; 0 other;
     gcaggtgaaa cgcttgatgc aggtttgaca gacgagcaaa agcaggcgga gaaagaaaag        60
     aaggagaaag agaaggcaga gaaggaacga gagaggcaga agcagttggc actcaagaaa       120
     ggcaaggatg tcgcacaaga agagggaaaa cgcgacaagg aagtaaacgc cggaacctct       180
     ggaactttca gcgtacccag acttaagagt ctgacaagca agatgcgcgt gccaagatac       240
     gagcaaagag tggccctaaa cctcgatcat ctaatcctat acacgccgga gcagacggat       300
     ctatccaaca cacgttcaac gcgaaagcag tttgacacat ggtttgaagg tgtaatggct       360
     gattacgaac tgacggagga caaaatgcaa atcattctca atggtttaat ggtctggtgc       420
     attgagaacg gaacctcccc gaacataaac ggaatgtggg tgatgatgga cggcgatgat       480
     caggtggaat tcccgatcaa accgctcatt gaccacgcca aacccacatt taggcagata       540
     atggcccatt tcagtgacgt tgctgaagcg tacattgaaa agcgtaacca ggaccgacca       600
     tacatgccac gatatggtct tcagcgcaac ttaaccgaca tgagcttagc tcgatacgcg       660
     tttgatttct atgaaatgac ttctagaact ccaatacgtg cgagagaagc acacatccag       720
     atgaaagcag cagcactgcg tggcgcaaat aacaatttgt tcggcttgga tggaaacgtt       780
     ggtacaacgg tagagaacac ggagaggcat acgaccgagg acgttaatcg gaacatgcat       840
     aacttacttg gcgttaaggg gttatgaagt tgtatgctgg tagactataa gtatttaagt       900
     ttactcgtta gtattctcgc ttatgggaaa tatgtaagtt tgttaaagca gccagtgtga       960
     ctttgtcacg tgtgttgttg ttactttcta tattttcgcc gaacatttta ttggtgttag      1020
     cgcatgtggt gaagatcatc ctcgattgcc ttaacatttg ataggatgcc agggac          1076
//