ID   AB179990; SV 1; linear; genomic RNA; STD; VRL; 1076 BP.
XX
AC   AB179990;
XX
DT   25-MAY-2004 (Rel. 79, Created)
DT   20-AUG-2004 (Rel. 80, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1076
RA   Ohshima K.;
RT   ;
RL   Submitted (18-MAY-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1099/vir.0.80124-0.
RX   PUBMED; 15302962.
RA   Tan Z., Wada Y., Chen J., Ohshima K.;
RT   "Inter- and intralineage recombinants are common in natural populations of
RT   Turnip mosaic virus";
RL   J. Gen. Virol. 85(Pt 9):2683-2696(2004).
XX
DR   MD5; 08b63763d24e22a9cc3b7f3a0e094c42.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1076
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="CH6"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..867
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q6L6C9"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q6L6C9"
FT                   /protein_id="BAD20404.1"
FT                   /translation="AGETLDAVLTEEQKQAEKERKERERSEKERERQRQLALKKGKNAA
FT                   QEEGERDNEVNAGTSGTFSVPRLKSLTSKMRVPKYEKRVALNLDHLILYTPEQTDLSNT
FT                   RSTRKQFDTWFEGVMADYELTEDKMHIILNGLMVWCIENGTSPNINGMWVMMDGDDQVE
FT                   FPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFD
FT                   FYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHTTEDVNRNMHN
FT                   LLGVKGL"
FT   mat_peptide     <1..864
FT                   /gene="CP"
FT                   /product="CP protein"
FT   3'UTR           868..1076
XX
SQ   Sequence 1076 BP; 335 A; 207 C; 278 G; 256 T; 0 other;
     gcaggtgaga cacttgatgc cgttctaacg gaagagcaga agcaggctga aaaggagaga        60
     aaggagagag agagatcaga gaaagagcga gaaaggcaaa gacagctagc gcttaagaaa       120
     ggtaaaaacg cagcacaaga agagggcgaa cgtgacaatg aagtaaacgc cggaacttcc       180
     ggaactttta gcgtgcctag acttaaaagt cttacaagca aaatgcgtgt gccgaagtac       240
     gagaaaagag ttgctctcaa cctcgatcat ttgatcttat acacgccgga gcagacagat       300
     ttatccaaca cgcgttcaac gcggaagcag tttgacactt ggtttgaagg tgtcatggct       360
     gactatgagc taacggagga taaaatgcat ataattctca atggtttaat ggtctggtgc       420
     attgagaatg gaacctcccc gaacataaac ggaatgtggg tgatgatgga cggagatgat       480
     caggtggaat tcccgatcaa gccgctcatt gaccacgcca aacccacatt taggcaaata       540
     atggcccatt tcagtgacgt agctgaagcg tacattgaaa agcgtaacca ggaccgacca       600
     tacatgccac gatatggtct tcagcgcaat ttaaccgaca tgagcttagc tcgttacgcg       660
     tttgatttct acgaaatgac ttctagaact ccaatacgtg cgagagaggc acacatccag       720
     atgaaagcag cagcactgcg tggcgcaaat aataatttgt tcggcttgga tgggaacgtc       780
     ggcacaacgg tagagaacac ggaaaggcat acgaccgaag acgttaatcg gaacatgcat       840
     aacttacttg gcgttaaggg gttatgaagt tgtatgctag tagactataa gtagttaagt       900
     ttactcgtta gtattctcgc ttatgggaaa tatgtaagtt tgttaaagca gccagtgtga       960
     cttcgtcatg tgtgttgttg ttactttcta tattttcgcc gaacttttta ttggtgttag      1020
     cgcatgtggt gagacactat ctcgattgcc ttaacatttg ataggaagca agggac          1076
//