ID   AB179963; SV 1; linear; genomic RNA; STD; VRL; 1527 BP.
XX
AC   AB179963;
XX
DT   25-MAY-2004 (Rel. 79, Created)
DT   20-AUG-2004 (Rel. 80, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: CHZC22.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1527
RA   Ohshima K.;
RT   ;
RL   Submitted (18-MAY-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1099/vir.0.80124-0.
RX   PUBMED; 15302962.
RA   Tan Z., Wada Y., Chen J., Ohshima K.;
RT   "Inter- and intralineage recombinants are common in natural populations of
RT   Turnip mosaic virus";
RL   J. Gen. Virol. 85(Pt 9):2683-2696(2004).
XX
DR   MD5; ed653315051c602ac6111231ff269ae9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1527
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="CHZC22"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>1527
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q6L6F6"
FT                   /db_xref="InterPro:IPR001730"
FT                   /db_xref="InterPro:IPR009003"
FT                   /db_xref="UniProtKB/TrEMBL:Q6L6F6"
FT                   /protein_id="BAD20377.1"
FT                   /translation="TDGISRHFMSDYGALEAVHHQNTSDMSKFLKLKGKWNKTLITRDV
FT                   LVLCGVLGGGLWMVIQHLRSKISEPVTHEAKGKRQRQKLKFRNARDNKMGREVYGDDDT
FT                   IQHFFGDAYTKKGKSKGRTRGLGHKNRKFINMYGFDPEDFSAVRFVDPLTGATLDDNPF
FT                   TDITLVQEHFGNIRMNLLGEDELEPNEIRMNKTIQAYYMNNKTGKALKVDLTPHIPLKV
FT                   CDLHATIAGFPERENELRQTGKAQPINIDEVPRANKELIPVDHESNSMFRGLRDYNPIS
FT                   NNICHLTNVSDGASNSLYGVGFGPLILTNRHLFERNNGELVIKSRHGEFVIKNTTQLHL
FT                   LPIPDRDLLLIRLPKDVPPFPQKLGFRQPEKGERICMVGSNFQTKSITSIVSETSTIMP
FT                   VENSQFWKHWISTKDGQCGSPMVSTKDGKILGLHSLANFQNSINYFAAFPDDFAEKYLH
FT                   TIEAHEWVKHWKYNTSAISWGSLNIQASQPSGLFKVSKLISDLDSTAVYAQ"
FT   mat_peptide     <1..63
FT                   /gene="CI"
FT                   /product="CI protein"
FT   mat_peptide     64..222
FT                   /gene="6K2"
FT                   /product="6K2 protein"
FT   mat_peptide     223..798
FT                   /gene="NIa-VPg"
FT                   /product="NIa-VPg protein"
FT   mat_peptide     799..>1527
FT                   /gene="NIa-Pro"
FT                   /product="NIa-Pro protein"
XX
SQ   Sequence 1527 BP; 492 A; 341 C; 357 G; 337 T; 0 other;
     accgatggaa tatctcggca tttcatgagt gattacggag ctcttgaggc agttcaccat        60
     caaaacacta gcgacatgag caaattcctc aagcttaagg gcaaatggaa caaaacgcta       120
     atcacgcgag atgtgttggt gctttgtgga gttctcggcg gtggattgtg gatggttatt       180
     cagcacctgc ggtcaaagat ttctgaaccc gtaactcacg aagcgaaagg caagaggcaa       240
     aggcagaaac taaagtttcg caatgcccga gacaacaaga tgggtagaga agtgtacgga       300
     gatgatgaca ccatacagca tttcttcggt gatgcctata caaagaaagg gaagagcaag       360
     ggcaggacac gtggtctcgg acacaaaaac aggaagttca tcaacatgta tgggtttgat       420
     cctgaagatt tctctgcagt tcgtttcgtg gatccactca caggagcgac gttggatgac       480
     aacccgttca cagacatcac ccttgtgcaa gagcacttcg gtaacataag aatgaacttg       540
     ctcggggagg atgagctgga accaaatgag atacgtatga ataaaacaat tcaggcctac       600
     tacatgaaca ataaaacagg caaggctttg aaggtggatc tgacaccaca catacctctc       660
     aaggtgtgtg atcttcatgc aaccattgct ggattcccag agcgagaaaa cgaactgagg       720
     cagactggaa aggctcagcc cattaacata gacgaagtgc caagagctaa taaagaactc       780
     atcccagtgg accacgagag taactccatg ttcagagggt tgcgcgacta caatccaata       840
     tcaaacaaca tttgtcatct cacaaatgtt tcagatggag catcaaactc attatatgga       900
     gtcggtttcg gaccactcat attaacgaac cgacacctct ttgagcggaa taacggtgaa       960
     ctcgtaataa aatcacgaca tggtgagttc gtgatcaaaa acacaactca gctacacttg      1020
     ctaccgattc cagacagaga tcttctgcta atccggttac caaaggacgt cccacccttt      1080
     ccacagaaat tgggtttcag gcaacctgag aaaggtgaaa gaatttgcat ggtggggtcc      1140
     aatttccaaa ctaagagcat aacgagtata gtctctgaga ctagcacaat aatgccagtg      1200
     gaaaacagtc agttttggaa acactggatt agtacgaaag acggccaatg cggaagtccg      1260
     atggtgagca cgaaagacgg gaaaatactc ggattacaca gcctagcaaa cttccagaac      1320
     tccatcaatt actttgctgc tttcccagat gattttgccg agaagtatct tcacaccatt      1380
     gaagcacacg agtgggttaa gcattggaaa tataacacta gtgccatcag ctggggctct      1440
     ttgaatatac aagcatcgca accgtcaggc ttgttcaaag taagcaagct aatctcagac      1500
     ctcgacagca cggcagtcta cgcacaa                                          1527
//