ID   AB179937; SV 1; linear; genomic RNA; STD; VRL; 1180 BP.
XX
AC   AB179937;
XX
DT   25-MAY-2004 (Rel. 79, Created)
DT   20-AUG-2004 (Rel. 80, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: ON16J.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1180
RA   Ohshima K.;
RT   ;
RL   Submitted (18-MAY-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1099/vir.0.80124-0.
RX   PUBMED; 15302962.
RA   Tan Z., Wada Y., Chen J., Ohshima K.;
RT   "Inter- and intralineage recombinants are common in natural populations of
RT   Turnip mosaic virus";
RL   J. Gen. Virol. 85(Pt 9):2683-2696(2004).
XX
DR   MD5; 2ca890c1188748a7df582156da2703b1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1180
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="ON16J"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   5'UTR           <1..94
FT   CDS             95..>1180
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q6L6I2"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q6L6I2"
FT                   /protein_id="BAD20351.1"
FT                   /translation="MAAVTFAPAITNAITNKPAPTGMVQFGSFPPMPLRSTTVTTIATL
FT                   VAQPKLYTVQFGSLDPVVVKSGAGSFAKATRQQPNVEIDVSLSEAAALEVAKPRSDAVL
FT                   RMHEEANKERALFLDWEASLKRSSYGIAENEKVVMTTRGVSKIVPRSSRAIKHKRARER
FT                   RRAQQPIILKWEPKLSGISIGGGLSASAIEAEEVRTKWPLHKTPSMKKRTVHRICRMND
FT                   QGVDMLIRSLVKIFKTKSANIEYIGKKSVKVDFIRKGQTKFARIQVAHLLGKRAQRDLS
FT                   TGMEENHFIDILSGHSGNKTTINPGVICAGWSGIVIRNGILTQKRSRSPSEAFVIRGEH
FT                   EGKLYDARIKVTRTMSHKIVHF"
FT   mat_peptide     95..>1180
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1180 BP; 392 A; 264 C; 295 G; 229 T; 0 other;
     gataaaagca aacacaaatc tttcgaagca ctcaagcaat caaagattct taaatctttc        60
     atcattacca aagcaatcac caacagcaaa ccaaatggca gcagttacat tcgcaccagc       120
     catcaccaac gccatcacca ataaaccagc acccaccgga atggtacagt ttgggagttt       180
     cccaccaatg ccattgcgat ccaccaccgt caccacaatc gccactttag tggcgcaacc       240
     taaactgtac acagtgcagt ttggaagcct tgacccagta gtcgtcaaga gtggagcagg       300
     gtcctttgct aaggcaacac gccagcagcc taacgttgaa atagacgtta gcctcagtga       360
     agccgcagct ctggaggttg cgaaacctag atcggatgcc gtgttgagga tgcacgagga       420
     agcaaacaag gagagagcac tctttctgga ctgggaggct agtctgaaga gaagctcgta       480
     tggaattgct gagaacgaga aagttgtaat gacaactcgt ggcgtcagca agatagtgcc       540
     cagaagttca agggcaataa agcacaagcg cgcaagggag aggcgtagag cgcagcaacc       600
     aattatacta aagtgggagc ctaaattgag cgggatctca atcggaggag gtctctctgc       660
     gagcgcaatc gaagcagaag aggttcgcac aaagtggccg cttcacaaaa caccgtcaat       720
     gaagaagagg acggtgcata gaatatgcag gatgaacgac caaggagttg acatgttgat       780
     acggtctctg gttaagattt tcaagactaa gagtgccaac attgagtaca tcggaaagaa       840
     gtcggttaag gtcgatttca tcagaaaagg acagacgaaa ttcgcaagaa ttcaagtagc       900
     acacttactc gggaagagag cacagcgcga cttgtcaact ggaatggaag aaaaccattt       960
     cattgacatt ctcagcgggc actcaggtaa caaaacaacc ataaatccag gagtaatctg      1020
     tgcaggttgg agtggcatag tcattagaaa tggaattcta acccaaaaac gaagcagaag      1080
     tccatcagag gcctttgtaa ttagaggtga gcacgaaggc aagttgtacg atgccaggat      1140
     caaagtcacg aggacaatga gccacaagat tgtgcacttt                            1180
//