ID   AB179925; SV 1; linear; genomic RNA; STD; VRL; 1180 BP.
XX
AC   AB179925;
XX
DT   25-MAY-2004 (Rel. 79, Created)
DT   20-AUG-2004 (Rel. 80, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: RAD1.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1180
RA   Ohshima K.;
RT   ;
RL   Submitted (18-MAY-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1099/vir.0.80124-0.
RX   PUBMED; 15302962.
RA   Tan Z., Wada Y., Chen J., Ohshima K.;
RT   "Inter- and intralineage recombinants are common in natural populations of
RT   Turnip mosaic virus";
RL   J. Gen. Virol. 85(Pt 9):2683-2696(2004).
XX
DR   MD5; 30912ed3a700ca8141081a7e136b72d0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1180
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="RAD1"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   5'UTR           <1..94
FT   CDS             95..>1180
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q6L6J4"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q6L6J4"
FT                   /protein_id="BAD20339.1"
FT                   /translation="MAAVTFASDITNAITNKPALTGMVQFGNFPPVPLRSTTITTVATS
FT                   VAQPKLYTVQFGSLDPVVIKGGAGSFAKATRQQPNVEIDVSLSEAAALEVAKSRSNTVL
FT                   RMHEEANKERALFLDWETSLKRSSYGIAENEKVIMTTRGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPIILKWEPKLSGISIGGGLSASAIEAEEDRTKWPLHKTPSMKKRTVHRICRMND
FT                   QGVDMLTRSLVKIFKIKSANIEYIGKKSIKVDFIRKERTKFARIQVAHLLGKRAQRDLS
FT                   TGMEENHFIDILSGYSGNKTTINPGVVCAGWSGIVVRNGILTQKRSRSPSEAFVIRGEH
FT                   EGKLYDARIKVTKTMSHKIVHF"
FT   mat_peptide     95..>1180
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1180 BP; 398 A; 252 C; 292 G; 238 T; 0 other;
     gattaaagca aacacaaatc tttcaaagca tccaagcaac caaagattct caaatctttc        60
     atcgttatca aagcaactac cgacagcaaa tcaaatggca gcagttacat tcgcatcaga       120
     tatcactaac gccatcacca acaaaccagc actcaccgga atggtacagt ttgggaattt       180
     cccaccagtg ccattgcgat ccaccaccat taccacagtc gccacttcag tggcgcaacc       240
     taaattgtac acagtgcagt ttggaagtct tgacccagta gtcatcaagg gtggagcagg       300
     gtcctttgct aaggcaacac gccagcagcc taacgttgaa atagacgtta gcctcagtga       360
     agccgcagct ctggaggttg cgaaatctag atcgaatacc gtgttgagaa tgcacgagga       420
     agcaaacaag gagagagcac tctttttgga ctgggagact agtttgaaga gaagttcgta       480
     tggaatcgcc gaaaacgaga aggttataat gacaactcgc ggcgtcagca agatagtgcc       540
     caggagttca agggcaatga agcaaaagcg cgcaagggag agacgtagag cgcagcaacc       600
     aattatacta aagtgggagc ccaaattaag cgggatttca atcggaggag ggctctctgc       660
     gagcgcgatc gaagcagaag aggatcgcac aaagtggccg cttcataaga caccgtcaat       720
     gaagaagagg acggtacaca ggatatgcag gatgaacgac caaggagttg acatgttgac       780
     acgatccctg gttaagattt tcaagattaa gagtgccaac attgagtaca tcggaaagaa       840
     gtcgattaag gtcgatttca tcagaaaaga acgaacgaaa ttcgcaagaa ttcaagtagc       900
     acacttactc gggaagagag cacagcgcga tttatcaact ggaatggaag aaaaccattt       960
     tattgacatt ctcagcgggt actcaggtaa caaaacaacc ataaatccag gagtagtttg      1020
     cgcaggttgg agtggtatag tcgttagaaa tggaattcta actcagaagc gaagcagaag      1080
     tccatcagag gcctttgtaa ttagaggcga gcacgaaggc aagttgtacg atgccaggat      1140
     caaagtcacg aagacaatga gtcacaagat tgtacacttt                            1180
//