ID   AB179923; SV 1; linear; genomic RNA; STD; VRL; 1180 BP.
XX
AC   AB179923;
XX
DT   25-MAY-2004 (Rel. 79, Created)
DT   20-AUG-2004 (Rel. 80, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: HZ6.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1180
RA   Ohshima K.;
RT   ;
RL   Submitted (18-MAY-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1099/vir.0.80124-0.
RX   PUBMED; 15302962.
RA   Tan Z., Wada Y., Chen J., Ohshima K.;
RT   "Inter- and intralineage recombinants are common in natural populations of
RT   Turnip mosaic virus";
RL   J. Gen. Virol. 85(Pt 9):2683-2696(2004).
XX
DR   MD5; a16b494bf93c30aa754ea6b2a8b7b156.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1180
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="HZ6"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   5'UTR           <1..94
FT   CDS             95..>1180
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q6L6J6"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q6L6J6"
FT                   /protein_id="BAD20337.1"
FT                   /translation="MAAVTFASAITNAITNKPAPTGMVQFGSFPPMPLRSTTVTTVATS
FT                   VAQPKLYTVQFGSLDPVVVKSGAGSFAKATRQQPNVEIDVSLSEAAALEVAKPRSNAVL
FT                   RMHEEANKERALFLDWEASLKRSSYGIAENEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPIILKWEPKPSEISIGGGLSASAIGAEEVRTKWPLHKTLSMKKRTVHRICRMND
FT                   QGVDMLTRSLVKIFKTKSANIEYIGKKSIKIDFIRKERTKFARIQVAHLLGKRAQRDLS
FT                   TGMEENHFIDILSGYSGNKTTINPGVVCAGWSGIVVRNGILTQKRSRSPSEAFVIRGEH
FT                   EGKLYDARIKVTRTMSHKIVHF"
FT   mat_peptide     95..>1180
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1180 BP; 389 A; 257 C; 302 G; 232 T; 0 other;
     gataaaagca aacacaaatc tttcgaagca tccaagcaat caaagattct caaatctttc        60
     atcgttatca aagcaatcac caacagcaaa ccaaatggca gcagttacat tcgcatcagc       120
     tatcaccaac gccatcacca ataaaccagc acccaccgga atggtacagt ttgggagttt       180
     cccaccaatg ccattgcgat ccaccaccgt gaccacagtc gccacttcag tggcgcaacc       240
     taaactgtac acagtgcagt ttggaagcct tgacccagta gtcgtcaaga gtggagcagg       300
     gtcctttgct aaggcaacac gccagcagcc taacgttgaa atagacgtta gcctcagtga       360
     agccgcagct ctggaggttg cgaaacctag gtcgaatgcc gtgttgagga tgcacgagga       420
     agcaaacaag gagagagcac tctttttgga ctgggaggct agtttgaaga gaagctcgta       480
     tggaattgct gagaacgaga aagttgtaat gacaactcgt ggcgtcagca agatagtgcc       540
     cagaagttca agggcaatga agcaaaagcg tgcaagggag aggcgtagag cgcagcaacc       600
     aattatacta aagtgggagc ccaaaccgag cgaaatctca atcggaggag ggctctctgc       660
     gagtgcgatc ggagcagaag aggttcgcac aaagtggccg cttcataaga cattgtcaat       720
     gaagaagagg acggtgcaca gaatatgcag gatgaacgac caaggagttg acatgttgac       780
     acgatccctg gttaagattt tcaagactaa gagtgccaac attgagtaca tcggaaagaa       840
     gtcgattaag atcgatttca tcagaaaaga acggacgaaa ttcgcaagaa ttcaagtagc       900
     acacttactc gggaagagag cacagcgcga cttatcaact ggaatggaag aaaaccattt       960
     tattgacatt ctcagcgggt actcaggtaa caaaacaacc ataaatccag gagtagtttg      1020
     cgcaggttgg agtggcatag tcgttagaaa tggaattcta acgcagaaac gaagcagaag      1080
     cccatcagag gcctttgtaa ttagaggtga gcacgagggc aagttgtacg atgccaggat      1140
     caaagtcacg aggacaatga gtcacaagat tgtgcacttt                            1180
//