ID   AB179917; SV 1; linear; genomic RNA; STD; VRL; 1180 BP.
XX
AC   AB179917;
XX
DT   25-MAY-2004 (Rel. 79, Created)
DT   20-AUG-2004 (Rel. 80, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: CHZJ25.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1180
RA   Ohshima K.;
RT   ;
RL   Submitted (18-MAY-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1099/vir.0.80124-0.
RX   PUBMED; 15302962.
RA   Tan Z., Wada Y., Chen J., Ohshima K.;
RT   "Inter- and intralineage recombinants are common in natural populations of
RT   Turnip mosaic virus";
RL   J. Gen. Virol. 85(Pt 9):2683-2696(2004).
XX
DR   MD5; 3d624b3f07a2b333d5ef1eaaae24dd1d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1180
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="CHZJ25"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   5'UTR           <1..94
FT   CDS             95..>1180
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q6L6K2"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q6L6K2"
FT                   /protein_id="BAD20331.1"
FT                   /translation="MAAVTFASAITNAITDKPALTGMVQFGSFPPMPLRSTTITTVATS
FT                   VAQPKLYTVQFGSLDPVVVKGGAGSFAKATRQQPNVEIDVSLSEAAALEVAKPESNAVL
FT                   RMHEEANKERALFLDWEASLKRSSYGIAENEKVVMTTRGASKIVPRSSRAMKQKRARER
FT                   RRAQQPIILKWEPKLSGISIGRGPSASAIEVEEVRTKWPLHKTPSMKKRMAHRTCKMND
FT                   QGIDMLTRSLIKIFKTKSANIEYIGKKSIKVDFIRKEQTKFARIQVAHLLGKRARRDLS
FT                   TGIEENHFIDILSEYSGNKTTINPGVVCAGWSGIVVRNGILAQRRSRSPSEAFVIRGEH
FT                   EGKLYDARIKVTRTMSHKIVHF"
FT   mat_peptide     95..>1180
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1180 BP; 390 A; 255 C; 298 G; 237 T; 0 other;
     gataaaagca aacacaaatc tttcggagca ttcaagcaat caaagattct taaatctttc        60
     atcgttatca aagcaatcac caacagcaaa tcaaatggca gcagttacat tcgcatcagc       120
     tatcaccaac gccatcaccg ataaaccagc actcaccgga atggtacagt ttgggagttt       180
     cccaccaatg ccattgcgat caaccaccat caccacagtc gccacttcag tggcgcaacc       240
     taaactgtac acagtgcagt ttggaagcct tgacccagta gtcgtcaagg gtggagcagg       300
     gtcctttgct aaggcaacac gccagcagcc taacgttgaa atagatgtta gcctcagtga       360
     agccgcagct ctggaggttg cgaaacctga atcgaatgcc gtgttgagga tgcacgagga       420
     agcaaacaag gagagagcac tctttttgga ctgggaggct agtttgaaaa gaagctcgta       480
     tggaattgcc gagaacgaga aagttgtgat gacaactcgt ggcgccagca agatagtgcc       540
     cagaagttca agggcaatga agcaaaagcg cgcaagggag aggcgtagag cgcagcagcc       600
     aattatacta aagtgggagc ccaaattgag tgggatctca attggaagag ggccctccgc       660
     gagcgcgatt gaagtagaag aagttcgcac aaagtggccg cttcacaaga caccgtcaat       720
     gaagaagagg atggcgcaca gaacatgcaa gatgaacgac caaggaattg acatgttgac       780
     acgatccctg attaagattt tcaagactaa gagtgccaac attgaataca tcgggaagaa       840
     atcgatcaag gttgatttca tcagaaaaga gcagacgaaa tttgcaagaa tccaagtagc       900
     acacttactc gggaagcgag cacgtcgcga cttgtcaact ggaatagaag aaaaccattt       960
     tattgatatt ctcagcgagt actcaggtaa taaaacaacc ataaatccag gagtagtttg      1020
     cgcaggttgg agtggcatag ttgttagaaa tggaattcta gcccagagac gaagcagaag      1080
     cccatcagag gcctttgtaa ttagaggtga gcacgaaggc aagttgtacg atgccaggat      1140
     caaagtcacg aggacaatga gtcacaagat tgtgcacttt                            1180
//