ID   AB179912; SV 1; linear; genomic RNA; STD; VRL; 1180 BP.
XX
AC   AB179912;
XX
DT   25-MAY-2004 (Rel. 79, Created)
DT   20-AUG-2004 (Rel. 80, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: CHZC22.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1180
RA   Ohshima K.;
RT   ;
RL   Submitted (18-MAY-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1099/vir.0.80124-0.
RX   PUBMED; 15302962.
RA   Tan Z., Wada Y., Chen J., Ohshima K.;
RT   "Inter- and intralineage recombinants are common in natural populations of
RT   Turnip mosaic virus";
RL   J. Gen. Virol. 85(Pt 9):2683-2696(2004).
XX
DR   MD5; 32ee029a57110dac892fdc55e0c7e18c.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1180
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="CHZC22"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   5'UTR           <1..94
FT   CDS             95..>1180
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q6L6K7"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q6L6K7"
FT                   /protein_id="BAD20326.1"
FT                   /translation="MAAVTFASAITNAITNKPAPTGMVQFGSFPPMPLRSTTVTTVATS
FT                   VAQLKLYTVQFGSLDPVVIKSGAGSFAKATRQQPNVEIDVSLSEAAALEVAKPRLNAVL
FT                   RMHEEANKERALFLDWEASLKRSSYGIAENEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPIILKWEPKLSGISIGGGLSASAIEAEEVRTKWPLHKTPSMKKRTVHRICRMND
FT                   QGVDMLTRSLVKIFKTKNANIEYIGKKSIKIDFIRKERTKFARIQVAHLLGKRAQRDLL
FT                   TGMEENHFIDILSGYSGNKITINPGVVCAGWSGIVVRNGILTQKRSRSPSEAFVIRGEH
FT                   EGKLYDARIKVTRTMSHKIVHF"
FT   mat_peptide     95..>1180
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1180 BP; 392 A; 252 C; 296 G; 240 T; 0 other;
     gataaaagca aacacaaatc tttcgaagca ctcaagcaat caaagattct caaatctttc        60
     atcgttatca aagcaatcac caacagcaaa ccaaatggca gcagttacat tcgcatcagc       120
     tattaccaac gccatcacca acaagccagc acccaccgga atggtacagt ttgggagttt       180
     cccaccaatg ccattgcgat ccaccaccgt caccacagtc gccacttcag tggcgcaact       240
     taaactgtac acagtgcagt ttggaagcct tgacccagta gttatcaaga gtggagcagg       300
     gtcctttgct aaggcaacac gccagcagcc taacgttgaa atagacgtta gcctcagtga       360
     agccgcagct ctggaggttg cgaaacctag attgaatgcc gtgttgagga tgcacgagga       420
     agcaaacaag gagagagcac tctttttgga ctgggaggct agtttgaaga ggagctcgta       480
     tggaattgct gagaatgaga aagttgtaat gacaactcgt ggcgtcagca agatagtgcc       540
     cagaagttca agggcaatga agcaaaaacg cgcaagggag aggcgtagag cacagcaacc       600
     aattatacta aagtgggagc ccaaattgag cgggatctca atcggaggag ggctctctgc       660
     aagcgcgatc gaagcagaag aggttcgtac aaagtggcca cttcataaga caccgtcaat       720
     gaagaagagg acggtgcaca gaatatgcag gatgaatgac caaggagttg acatgttgac       780
     acgatccttg gttaagatct tcaagactaa gaatgccaac attgagtaca tcggaaagaa       840
     gtcgattaag atcgatttca tcagaaaaga acggacgaaa ttcgcaagaa ttcaagtagc       900
     acacttactc gggaagcgag cacagcgcga cttattaact ggaatggaag aaaaccattt       960
     tattgacatt cttagcgggt actcaggtaa caaaataacc ataaatccag gagtagtttg      1020
     cgcaggttgg agtggcatag tcgttagaaa tggaattcta acccagaaac gaagcaggag      1080
     tccatcagag gcctttgtaa ttagaggtga gcacgaaggc aagttgtacg atgccaggat      1140
     caaagtcacg aggacaatga gtcacaagat tgtgcacttt                            1180
//