ID   AB179911; SV 1; linear; genomic RNA; STD; VRL; 1180 BP.
XX
AC   AB179911;
XX
DT   25-MAY-2004 (Rel. 79, Created)
DT   20-AUG-2004 (Rel. 80, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: CHZC21.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1180
RA   Ohshima K.;
RT   ;
RL   Submitted (18-MAY-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1099/vir.0.80124-0.
RX   PUBMED; 15302962.
RA   Tan Z., Wada Y., Chen J., Ohshima K.;
RT   "Inter- and intralineage recombinants are common in natural populations of
RT   Turnip mosaic virus";
RL   J. Gen. Virol. 85(Pt 9):2683-2696(2004).
XX
DR   MD5; 164eb96334ccd13409fa4f7a0ad605fe.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1180
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="CHZC21"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   5'UTR           <1..94
FT   CDS             95..>1180
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q6L6K8"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q6L6K8"
FT                   /protein_id="BAD20325.1"
FT                   /translation="MAAVTFASAITNAITNKPALTGMVQFGSFPPMPLRSTTVTTVATS
FT                   VAQPKLYTVQFGSLDPVVVKGGAGSFAKATRQQPNVEIDVSLSEAAALEVAKPGLNAVL
FT                   RMHEEANKERALFLDWEASLKRSSYGIAENEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPIILKWEPKLSGISIGGGPSASAIEVEEVCTKWPLHKTPSMKKRVVHRTCKMNN
FT                   QGVDMLTRSLVKIFKTRSANIEYIGKKSIKVDFIRKEQTKFARIQVAHLLGKRARRDLS
FT                   SGMEENHFIDILSEYSGNKTTINPGVVCAGWSGIVVRNGILAQRRSRSPSEAFVIRGEH
FT                   EGKLYDARIKVTRTMSHKIMHF"
FT   mat_peptide     95..>1180
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1180 BP; 384 A; 258 C; 302 G; 236 T; 0 other;
     gataaaagca aacacaaatc tttcggagca ttcaagcaat caaagattct taaatctttc        60
     atcgttatca aagcaatcac caacagcaaa ccaaatggca gcagttacat tcgcatcagc       120
     tatcaccaac gccatcacca ataaaccagc actcaccgga atggtacagt ttgggagttt       180
     cccaccaatg ccattgcgat ccaccaccgt caccacagtc gccacttcag tggcgcagcc       240
     taaactgtac acagtgcagt ttggaagcct tgacccagta gtcgtcaagg gtggagcagg       300
     gtcctttgct aaggcaacac gccagcagcc taacgttgaa atagacgtta gcctcagtga       360
     agccgcagct ctggaggttg cgaaacctgg actgaatgcc gtgttaagga tgcacgagga       420
     agcaaacaag gagagagcac tctttttgga ctgggaggct agtttgaaaa gaagctcgta       480
     tggaattgct gagaacgaga aagttgtgat gacaactcgt ggcgtcagca agatagtgcc       540
     cagaagttca agggcaatga agcaaaagcg cgcaagggag aggcgtagag cgcagcaacc       600
     aattatacta aagtgggagc ccaaattgag cgggatctca attggaggag ggccttccgc       660
     gagcgcgatc gaagtggaag aagtctgcac aaagtggccg cttcacaaga caccatcaat       720
     gaagaagagg gtggtgcaca gaacatgcaa aatgaacaac caaggagttg acatgttgac       780
     acgatccctg gttaagattt tcaagactag gagtgccaac attgaataca tcgggaagaa       840
     atcgatcaag gttgatttca tcagaaaaga gcagacgaaa tttgcaagaa tccaagtagc       900
     acacttactc gggaagcgag cacgtcgtga cttgtcatct ggaatggaag aaaaccattt       960
     tattgacatt ctcagcgagt actcaggcaa caaaacaacc ataaatccag gagtagtttg      1020
     cgcaggttgg agtggcatag ttgttagaaa tggaattcta gcccagagac gaagcaggag      1080
     cccatcagag gcctttgtaa ttagaggtga gcacgaaggc aagttgtacg atgccaggat      1140
     caaagtcacg aggacaatga gtcacaagat tatgcacttt                            1180
//