ID   AB179910; SV 1; linear; genomic RNA; STD; VRL; 1180 BP.
XX
AC   AB179910;
XX
DT   25-MAY-2004 (Rel. 79, Created)
DT   20-AUG-2004 (Rel. 80, Last updated, Version 2)
XX
DE   Turnip mosaic virus gene for polyprotein, partial cds, isolate: CHZC1.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1180
RA   Ohshima K.;
RT   ;
RL   Submitted (18-MAY-2004) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   DOI; 10.1099/vir.0.80124-0.
RX   PUBMED; 15302962.
RA   Tan Z., Wada Y., Chen J., Ohshima K.;
RT   "Inter- and intralineage recombinants are common in natural populations of
RT   Turnip mosaic virus";
RL   J. Gen. Virol. 85(Pt 9):2683-2696(2004).
XX
DR   MD5; 20298cb3d01516ca0ee43f21686c64bd.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1180
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="CHZC1"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   5'UTR           <1..94
FT   CDS             95..>1180
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q6L6K9"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q6L6K9"
FT                   /protein_id="BAD20324.1"
FT                   /translation="MAAVTFAPAITNAITNKPASTGMVQFGSFPPVPLQSTTVTTVATS
FT                   VAQPKLYTVQFGSLDPVVVKGGTGSFAKATRQQPNVEIDVSLSEAAALEVATPRSNAVL
FT                   RMHEEANKERALFLDWEASLKRSSYGIAENEKVIMTTRGVSKIVPRSSRAMKQKRTRER
FT                   RRAQQPIILKWEPKLSAISIGGGLSASAIEVEEVRTKWPLHKTPSMKKKTVHKTCKMND
FT                   QGIDMLTRSLVKIFKTKSANIEYIGRELIKVDFIRKERTKFARIQVAHLLGKRAQRDLS
FT                   TGMEENHFIDILSEYSGNKTTINPGVICAGWSGIVVRNEILTQKRSRSPSEAFVIRGEH
FT                   EGKLYDARIKVTRTMSHKIMHF"
FT   mat_peptide     95..>1180
FT                   /gene="P1"
FT                   /product="P1 protein"
XX
SQ   Sequence 1180 BP; 392 A; 259 C; 293 G; 236 T; 0 other;
     gattaaagca aacacaaatc tttcaaagca tccaagcaat caaagattct caaatctttc        60
     atcgttatca aagcaaccac caacagcaaa tcaaatggca gcagttacat ttgcaccagc       120
     tatcactaac gccatcacca acaaaccagc atccaccgga atggtacagt ttgggagttt       180
     cccaccagtg ccattgcaat ccaccaccgt caccacagtc gccacttcag tggcgcagcc       240
     taaactgtac acagtgcagt ttggaagtct tgacccagta gtcgtcaagg gtggaacagg       300
     gtcctttgct aaggcaacac gccagcagcc taacgttgaa atagacgtta gcctcagtga       360
     agccgcagct ctggaggttg cgacacctag atcgaatgcc gtgttgagaa tgcacgagga       420
     agcaaataag gagagagcac tctttttgga ctgggaggct agtttgaaga gaagttcgta       480
     cggaatcgcc gaaaacgaga aggttataat gacaactcgt ggcgtgagca agatagtgcc       540
     caggagttca agggcaatga agcaaaagcg cacaagggag agacgtagag cgcaacagcc       600
     aattatacta aagtgggagc ccaaattgag cgcgatctca attggaggag gactctccgc       660
     gagcgcgatc gaagtagagg aagtccgcac aaagtggccg cttcataaga caccgtcaat       720
     gaagaagaag acggtgcaca aaacatgtaa gatgaacgac caaggaattg acatgttgac       780
     acgatccctg gttaagattt tcaagaccaa gagtgccaac attgagtaca tcgggaggga       840
     attgatcaag gttgatttca tcagaaaaga gcggacgaaa ttcgcaagaa tccaagtagc       900
     acacttactc gggaagcgag cacagcgcga cttgtcaact ggaatggaag aaaaccattt       960
     tattgacatt ctcagcgagt actcaggcaa taaaacaact ataaatccag gagttatttg      1020
     cgcaggttgg agtggcatag tcgttagaaa tgaaattcta acccagaaac gaagcaggag      1080
     tccatcagag gcctttgtaa ttagaggtga gcacgaaggc aagttgtatg atgccaggat      1140
     taaagtcacg aggacaatga gtcacaagat tatgcacttt                            1180
//