ID AB178945; SV 1; circular; genomic DNA; STD; VRL; 2764 BP. XX AC AB178945; XX DT 13-MAY-2004 (Rel. 79, Created) DT 06-JUL-2018 (Rel. 137, Last updated, Version 5) XX DE Honeysuckle yellow vein virus DNA, complete genome, isolate: FK1. XX KW . XX OS Honeysuckle yellow vein virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2764 RA Were H.K., Takanami Y.; RT ; RL Submitted (11-MAY-2004) to the INSDC. RL Contact:Yoichi Takanami Kyushu University, Faculty of Agriculture; 6-10-1 RL Hakozaki, Higashi-ku, Fukuoka, Fukuoka 812-8581, Japan XX RN [2] RA Were H.K., Takanami Y.; RT "Honeysuckle yellow vein mosaic virus"; RL Unpublished. XX DR MD5; 2b54e6bf4aff6d109e8c376a424fd6c9. XX FH Key Location/Qualifiers FH FT source 1..2764 FT /organism="Honeysuckle yellow vein virus" FT /isolate="FK1" FT /mol_type="genomic DNA" FT /country="Japan:Fukuoka, Ukiha" FT /clone="pHSFUKUOKA" FT /note="originally submitted 'Honeysuckle yellow vein mosaic FT virus'" FT /note="synonym:Honeysuckle-infecting geminivirus" FT /db_xref="taxon:240865" FT CDS 138..488 FT /codon_start=1 FT /transl_table=1 FT /gene="V2" FT /product="V2" FT /db_xref="GOA:Q6L6X2" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q6L6X2" FT /protein_id="BAD18931.1" FT /translation="MWDPLLNDFPETVHGFRCMLAVKYLLLVEATYSPDTVGYDLIRDL FT IGVVRAKNYVEATSRYRDFHSRIQGTSPSELRRPVCQPCECPHCPRHKQKEIMGSKAHV FT SEAQDIQDVQKP" FT CDS 298..1071 FT /codon_start=1 FT /transl_table=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:Q6L6X1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q6L6X1" FT /protein_id="BAD18932.1" FT /translation="MSKRPADIGIFTPAFKVRRRLNFDGPYVSRVNVPIAQGTSKKRSW FT AQRPMYRKPRIYRMYRSPDVPKGCEGPCKVQSFEKKDDVGHSGKMLCISDITRGNGLTH FT RVVRGFGIKSVYIIGKIWMDENIKLKNHTNNVIFWLVRDRRPVSVPYGFQEAFNMYENE FT PSTATIKQDLRDRLQVLHKFTGTVTGGQYASKEQAMIKRFWRLNHHVTYNHQEAAKYEN FT HTENALLLYMACTHASNPVYATLKIRVYFYDSVQN" FT CDS complement(1068..1472) FT /codon_start=1 FT /transl_table=1 FT /gene="C3" FT /product="replication enhancer protein" FT /db_xref="GOA:Q6L6X0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q6L6X0" FT /protein_id="BAD18933.1" FT /translation="MDSRTGDIITAAQAQSGAYIWTVPNPLYFKITSHAQRPFNMDQDI FT ITAQIQFNHNLRSQLGLHKCFLTFKIWTLSHHQTSHFLILFRTQVLKYLDDLGVISINN FT VIKAVDHVLYDVLDGTEYVQQFTDIKFKLY" FT CDS complement(1213..1620) FT /codon_start=1 FT /transl_table=1 FT /gene="C2" FT /product="transcriptional trans-activator protein" FT /db_xref="GOA:Q6L6W9" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q6L6W9" FT /protein_id="BAD18934.1" FT /translation="MQTSSPSTAHSTPVPIKVRHRSEKKRAPRRRRIDLNCGCSIYVSL FT GCANHGFTHRGHHHCSSGSEWRVYLDSAKSPLFQNHEPRTTTVQHGSGHNNSTDPIQPQ FT SQISTGSTQVLPDFQDLDSLTSSDLAFLNFI" FT CDS complement(1520..2611) FT /codon_start=1 FT /transl_table=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:Q6L6W8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q6L6W8" FT /protein_id="BAD18935.1" FT /translation="MAPPKRFKINSKNYFLTYPHCSLTKEEALAQIQALQTPTKKLFIR FT ICRELHEDGSPHLHILIQFEGKYQCTNQRFFDLVSPSRSAHFHPNIQGAKSSSDVKAYM FT EKDGDLVDFGVFQVDGRSARGGCQSANDAYAEAINSGSKSSALSILREKAPKDFVLQFH FT NLNSNLDRIFAPPLEEFVSPFLSSSFDQVPEQLEEWAAENVRDSAARPWRPMSIVIEGD FT SRTGKTMWARSIHPRHNYLCGHLDLSPKVYSNEAWYNVIDDVDPHYLKHFKEFMGAQRD FT WQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYTEYLDEEKNAALKAWAIKNANFITLYGP FT LYSSTHQSATQIREEESTSQAED" FT CDS complement(2161..2454) FT /codon_start=1 FT /transl_table=1 FT /gene="C4" FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q6L6W7" FT /protein_id="BAD18936.1" FT /translation="MGALISTYSSNSKENTNAQINDSSISYPHLGQHISIQTFRELRAR FT QMSRPTWKKTETSLILEFSRSMEDQLEEVASLPTTHMPRQSTQGPSHRPCLY" XX SQ Sequence 2764 BP; 730 A; 558 C; 633 G; 843 T; 0 other; accggatggc cacgcgaaat ttcgtggtgg gcccccctct gtcggccaat agaattagtg 60 ccttgaaagt tagataagtg gatgttgacg tcatcttttg tctttatata cgtcagccct 120 aattttaaag gttaaacatg tgggatcctt tacttaacga tttccctgaa accgtacacg 180 gttttaggtg tatgctagcg gttaaatacc ttcttctggt tgaggctaca tactctccag 240 atacggtggg ttacgatctc atacgcgatc ttataggtgt tgttcgtgcg aagaattatg 300 tcgaagcgac cagcagatat agggattttc actcccgcat tcaaggtacg tcgccgtctg 360 aacttcgacg gcccgtatgt cagccgtgtg aatgtcccca ttgcccaagg cacaagcaaa 420 aagagatcat gggctcaaag gcccatgtat cggaagccca ggatatacag gatgtacaga 480 agccctgatg tacctaaggg ttgtgaaggc ccctgtaagg tccagtcttt cgagaagaaa 540 gatgatgttg gtcactctgg taaaatgtta tgtatctccg atattactcg tggtaatggg 600 cttacacatc gtgttgtaag aggttttggt ataaaatcag tctatatcat tggaaagata 660 tggatggatg agaacattaa gctcaagaat cacactaata acgtgatctt ctggcttgtt 720 agagatagac gccctgtttc cgttccttat ggtttccaag aggcgtttaa tatgtacgaa 780 aatgaaccta gtacagctac tatcaaacag gatttgagag accgcttgca ggttttacac 840 aagttcactg gtacggttac aggtggacaa tatgcgtcta aggaacaagc tatgatcaag 900 cgtttctgga ggttgaatca ccatgtcaca tacaatcacc aagaggctgc taaatatgag 960 aaccatactg aaaatgcttt gttattgtat atggcctgta ctcatgccag taatccagtg 1020 tatgctacat taaaaattag agtgtatttc tacgattcag tacagaatta ataaagcttg 1080 aatttaatat cagtaaattg ttgtacatac tctgttccat ctaatacatc gtacaataca 1140 tgatcaactg ccttaattac attattaatt gaaattacac ccaaatcatc taaatacttc 1200 aacacttgtg tcctaaataa aattaagaaa tgcgaggtct gatgatgtga gagagtccag 1260 atcttgaaag tcaggaagca cttgtgtaga cccagttgag atctgagatt gtggttgaat 1320 tggatctgtg ctgttattat gtcctgatcc atgttgaacg gtcgttgtgc gtggctcgtg 1380 attttgaaat aaaggggatt tggcactgtc cagatatacg cgccactctg agcctgagct 1440 gcagtgatga tgtcccctgt gcgtgaatcc atgatttgca caccctaaac tgacgtatat 1500 agaacacccg cagtttagat caatcctccg cctgcgaggt gctctcttct tctctgatct 1560 gtgtcgcact ttgatgggta ctggagtaga gtgggccgta gagggtgatg aagtttgcat 1620 ttttaattgc ccaggccttt agggcagcat tcttctcctc gtctaaatac tctgtgtatg 1680 atgacgttgg gcctggattg cagaggaaga ttgttgggat accaccttta atttgaattg 1740 gtttcccgta cttggtgttg ctttgccagt ccctttgggc ccccatgaat tctttaaagt 1800 gctttaggta gtggggatcc acgtcatcaa tgacgttgta ccatgcctcg ttgctgtaaa 1860 ccttggggct taagtcaagg tggccgcaaa ggtaattatg acgtggatgt atagacctgg 1920 cccacatagt cttccctgtc ctgctatccc cttctatcac aatactcatg ggcctccacg 1980 gccgcgcagc ggaatccctg acgttctcgg cagcccattc ctcaagttgc tctggaactt 2040 gatcaaatga agaagataaa aaaggagaaa caaattcctc caacggagga gcaaaaatcc 2100 tatctaaatt actatttaaa ttatgaaatt gtaaaacaaa atctttggga gctttctccc 2160 ttaatataga caaggccgat gacttggacc ctgagttgat tgcctcggca tatgcgtcgt 2220 tggcagactg gcaacctcct ctagctgatc ttccatcgac ctggaaaact ccaaaatcaa 2280 cgaggtctcc gtctttttcc atgtaggcct tgacatctga cgagctctta gctccctgaa 2340 tgtttggatg gaaatgtgct gacctagatg gggatacgag atcgaagaat cgttgatttg 2400 tgcattggta ttttccttcg aattggatga gtatgtggag atgagggctc ccatcttcgt 2460 gtagttctct gcagattcgg atgaataatt ttttggttgg tgtttgtagg gcttgaattt 2520 gtgcaagggc ttcttctttg gttagagagc agtgtgggta tgtgaggaaa taatttttgc 2580 tatttatttt aaaacgcttt ggtggtgcca tatttacaaa tatgcccttg taccccgatt 2640 cggagagaaa ccttctttgc tgtgaatcgg tgtaatgggg tacaatatat actcctcctc 2700 tttttacttt ttaattttga aattcaaaat tcaaattggt aaagcggccc atccgtataa 2760 tatt 2764 //