ID AB176848; SV 1; linear; genomic RNA; STD; VRL; 3039 BP. XX AC AB176848; XX DT 14-APR-2004 (Rel. 79, Created) DT 14-APR-2004 (Rel. 79, Last updated, Version 1) XX DE Cucumber mosaic virus DNA, complete RNA2 segment, strain: TN. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3039 RA Hase S.; RT ; RL Submitted (12-APR-2004) to the INSDC. RL Shu Hase, Graduate School of Agricultural Science, Tohoku University, RL Laboratory of Plant Pathology, Department of Applied Plant Science; RL 1-1,Tsutsumidori-Amamiyamachi, Aoba-ku, Sendai, Miyagi 981-8555, Japan RL (E-mail:hase@bios.tohoku.ac.jp, Tel:81-22-717-9659, Fax:81-22-717-9659) XX RN [2] RA Takanami H., Hase S., Karasawa A., Takahashi H., Ehara Y.; RT "Genomic and satellite RNA sequence of Cucumber mosaic virus strain TN."; RL Unpublished. XX DR MD5; c650a5da21b0abd2cadfff28864385f1. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..3039 FT /organism="Cucumber mosaic virus" FT /segment="RNA2" FT /lab_host="Nicotiana tabacum" FT /strain="TN" FT /mol_type="genomic RNA" FT /country="Japan" FT /isolation_source="tomato" FT /clone="pCTN2-T7" FT /db_xref="taxon:12305" FT CDS 93..2615 FT /codon_start=1 FT /transl_table=1 FT /gene="2a" FT /product="2a protein" FT /db_xref="GOA:Q75ND6" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q75ND6" FT /protein_id="BAD15370.1" FT /translation="MTSPPPTFSFANLLNGSYGVDTPEEVERVRREQREDAEAALRNYK FT PLPTVDVSESVPRDEPIVSQTVTTAPVTSVVDAFVSFGAEDYLEMSPSELLSAFELMVK FT PLRIGEVLCPNFDRSLFISSVAMARTLLLAPLTSTRTLKRFEDLVAAIYLKTDFFLEDD FT EPQTDVSQSDVPGYIFEPGQHSSGFEPPPICAKCDLILYQCPCFDFNALRESCAEKTFS FT HDYVIEGLDGVIDNATLLSNLGPFLLPVHCSYSKTEDPDFVVDPSLARPTDRVDAHVVQ FT AVCDTTLPTHVNYDDSFHQVFVDSADYSIDMDHVRLRQSDLVAKIPDGGHMLPVLNTGS FT GHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFRLSYMNVDALAKSNFVN FT VVGNFHAYMQKWQSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVTDTLNVDRPVPATI FT TFHKKTITSQFSPLFISLFERFQRCLRERIVLPVGKISSLEMTGFSVLNKHCLEIDLSK FT FDKSQGEFHLMIQEHILNDLGCPAPVTKWWCDFHRFSYIKDKRAGVGMPISFQRRTGDA FT FTYFGNTIVTMAEFAWCYDTDQFDRLLFSGDDSLAFSKLPPVGDPSKFTTLFNMEAKVM FT EPAVPYICSKFLLSDEFGNTFSVPDPLREIQRLGTKKIPYSDNNDFLFAHFMSFVDRLK FT FMDRMSQSCIDQLSIFFELKYKKSGNEAALVLGAFKKYTANFNAYKELYYSDRQQCDLV FT NTFCISEFQVIRRTTVKKKKNGCVDSSGVDRRPPPSPFAGGETSKTEVSRQKPASEGLQ FT KSQRESAIHSEIFPDVTIPRSRSRGLVS" FT CDS 2413..2715 FT /codon_start=1 FT /transl_table=1 FT /gene="RNA4A" FT /product="2b protein" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:Q8QHS9" FT /protein_id="BAD15371.1" FT /translation="MDVLTVVVSTADLHLAHLQEVKRRRRRSHVRNRRARGYKSPSERA FT RSIARFFQMLPFHGVDPVDWFPDVVRSPSVTSLVSYESFDDTDWFAGNEWAEGSF" XX SQ Sequence 3039 BP; 719 A; 697 C; 685 G; 938 T; 0 other; gtttattctc aagagcgtat ggttcaaccc ctgcctcctc tgtgaaatta ccctagtttt 60 attgatctac ttctagtctc ttttctgtta ctatgacaag tcctccaccc actttctcat 120 tcgccaatct gttgaatggc tcctatggtg ttgacactcc cgaggaagtg gaacgcgtta 180 gacgtgaaca acgcgaagat gctgaggcgg ctttacgtaa ttataagcct ttacccactg 240 tggatgtcag tgagagtgtc cctagagacg aacctattgt ctcgcaaacc gtcactacag 300 ctcctgttac atcagtcgtt gacgcgtttg tttcttttgg tgctgaggac taccttgaaa 360 tgtccccatc tgagctgctt tccgcttttg agttgatggt caaacccttg cgtatcggtg 420 aagtgttgtg cccgaatttt gatcgttcgc tattcatctc cagcgtcgct atggctagga 480 cgttgttgtt ggcaccactc acatccaccc gaacgttgaa gcgttttgaa gaccttgtgg 540 ccgcgatcta tctaaaaact gattttttct tagaagacga tgagccccag actgatgtct 600 cccaaagcga tgtgcccggt tatatcttcg aaccagggca acactcatcc ggttttgaac 660 ccccccctat ttgtgctaaa tgtgacttga ttttgtatca atgtccgtgt ttcgatttta 720 acgcacttcg tgagtcttgc gcagagaaaa cattctctca cgactatgtt atcgagggtc 780 tcgatggtgt cattgataac gctacgctgt tatcaaattt gggaccattt ttgttacctg 840 tccattgttc ttattcaaag accgaggacc ccgatttcgt cgttgatcct agtcttgcgc 900 gacctactga tagggttgat gcacatgtag ttcaagccgt ttgcgatacc actctgccca 960 cccatgttaa ctacgatgat tcctttcatc aagtctttgt ggactctgct gattattcca 1020 ttgacatgga tcacgttcgg ttacgtcaat ccgatttagt agcaaaaatt ccggatggtg 1080 ggcatatgtt accggtgtta aataccggga gtggtcacaa gagagtaggt actacgaagg 1140 aggtcttaac agcaataaag aaaagaaatg ctgatgtccc tgagcttggt gactctgtta 1200 atctgtcacg cctgagcaaa gcagtagccg aacggtttcg tctctcgtat atgaatgttg 1260 acgctttggc taagagtaac tttgttaatg ttgtcggtaa ttttcacgct tacatgcaaa 1320 aatggcaatc ttctgggctt tcttatgatg atcttcctga tcttcacgcg gagaatttac 1380 agttttatga tcacatgatt aagtccgatg ttaagccagt tgtcaccgac acgttgaacg 1440 tcgacagacc tgtcccagct actattacat ttcacaaaaa gaccataaca tcccagttct 1500 caccgttgtt tatatctctg tttgagagat tccagagatg ccttcgggaa cgtattgttc 1560 tgcccgttgg taagatttcc tcccttgaga tgactggttt ttcagtcttg aacaaacatt 1620 gtcttgaaat tgatttatct aaattcgaca aatctcaagg tgagttccac cttatgattc 1680 aagagcacat tctcaacgat cttggttgcc cagcacccgt caccaaatgg tggtgtgact 1740 ttcataggtt ttcctatatt aaagacaaac gtgctggggt tggaatgccc atcagctttc 1800 aacgccgtac tggtgacgct ttcacctatt ttggcaatac tattgtcacg atggctgagt 1860 ttgcttggtg ttatgacact gatcaatttg accgattgct cttttctggt gatgattctc 1920 tggctttttc taagctccca cctgttggag atcccagtaa gtttacaact ttattcaaca 1980 tggaagctaa ggtgatggaa cctgcagtac cttacatttg ttcgaagttt ctactctctg 2040 atgagtttgg taacacgttt tcagtccccg acccactacg cgaaatccag cggttaggta 2100 ccaagaagat accgtactcg gacaataacg atttcttgtt cgctcatttt atgagttttg 2160 ttgacaggct gaagtttatg gacaggatgt cgcagtcctg tattgatcaa ttgtccattt 2220 tcttcgagtt gaaatacaag aagtccggga acgaagccgc cctagttttg ggcgcgttta 2280 agaagtacac cgctaatttt aacgcctata aggagcttta ctactctgac cgtcaacaat 2340 gtgacttggt caatacgttt tgtatatctg agttccaggt gattcgtcgc actaccgtta 2400 agaagaagaa gaatggatgt gttgacagta gtggtgtcga ccgccgacct ccacctagcc 2460 catttgcagg aggtgaaacg tcgaagacgg aggtctcacg tcagaaaccg gcgagcgagg 2520 ggttacaaaa gtcccagcga gagagcgcga tccatagcga gatttttcca gatgttacca 2580 ttccacggag tagatcccgt ggattggttt cctgatgtcg ttcgctctcc gtccgttacc 2640 agccttgttt cttatgaatc tttcgatgat actgattggt ttgctggtaa cgaatgggcc 2700 gaagggtcgt tttgatttcc gatccttcgt cgtccgaaga cgttaaacta cgctctcttt 2760 attgcgagtg ctgagttggt agttttgctc taaactatct gaagtcgctg aatccattat 2820 tggttgcgaa cgggttgtcc atccagctta cggctaaaat ggtcagtcat gccccaaagg 2880 catgccgaca ccctacaggg ttgtcgaggt acccttgaaa tcatctccta gatttcttcg 2940 gaagggcttc gtgagaagct cgtgcacggt aatacactga tattaccaag agtgcgggta 3000 tcgcctgtgg ttttccacag gttctccata aggagacca 3039 //