ID   AB176847; SV 1; linear; genomic RNA; STD; VRL; 2205 BP.
XX
AC   AB176847;
XX
DT   14-APR-2004 (Rel. 79, Created)
DT   14-APR-2004 (Rel. 79, Last updated, Version 1)
XX
DE   Cucumber mosaic virus DNA, complete RNA3 segment, strain: TN.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2205
RA   Hase S.;
RT   ;
RL   Submitted (12-APR-2004) to the INSDC.
RL   Shu Hase, Graduate School of Agricultural Science, Tohoku University,
RL   Laboratory of Plant Pathology, Department of Applied Plant Science;
RL   1-1,Tsutsumidori-Amamiyamachi, Aoba-ku, Sendai, Miyagi 981-8555, Japan
RL   (E-mail:hase@bios.tohoku.ac.jp, Tel:81-22-717-9659, Fax:81-22-717-9659)
XX
RN   [2]
RA   Takanami H., Hase S., Karasawa A., Takahashi H., Ehara Y.;
RT   "Genomic and satellite RNA sequence of Cucumber mosaic virus strain TN.";
RL   Unpublished.
XX
DR   MD5; 08bcfcf3b88407801b7bd6139611e024.
DR   EuropePMC; PMC3550734; 23637513.
DR   EuropePMC; PMC3650197; 24426254.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2205
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /lab_host="Nicotiana tabacum"
FT                   /strain="TN"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan"
FT                   /isolation_source="tomato"
FT                   /clone="pCTN3-T7"
FT                   /db_xref="taxon:12305"
FT   CDS             97..936
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="3a"
FT                   /product="3a protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q75ND8"
FT                   /protein_id="BAD15368.1"
FT                   /translation="MAFQGPSRTLTQQSSAASSDDLQKILFSPDAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPQVTSNNLLSFFKSGYDAGELRSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLKIYLADLGDKELSPIDGQCVTLHNHELPALISFQPTYDCPMELVGNRHRCFAVVVE
FT                   RHGYIGYGGTTASVCSNWQAQFSSKNNNYTHAAAGKTLVLPYNRLAEHSKPSAVARLLK
FT                   SQLNNVSSSRYLLPNVALNQNASGHESEILNESPPIAIGSPSASRNNSFRSQVVNGL"
FT   CDS             1228..1884
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:O36187"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:O36187"
FT                   /protein_id="BAD15369.1"
FT                   /translation="MDKSGSPNASRTSRRRRPRRGSRSASGADAGLRALTQQMLKLNKT
FT                   LAIGRPTLNHPTFVGSESCKPGYTFTSITLKPPEIEKGSYFGRRLSLPDSVTDYDKKLV
FT                   SRIQIRINPLPKFDSTVWVTVRKVPSSSDLSVAAISAMFGDGNSPVLVYQYAASGVQAN
FT                   NKLLYDLSEMRADIGDMRKYAVLVYSKDDKLEKDEIVLHVDVEHQRIPISRMLPT"
XX
SQ   Sequence 2205 BP; 503 A; 517 C; 520 G; 665 T; 0 other;
     gtaatcttac cactttcttt ccacgtcgtg tcgcgtcagt ccacgctgtg tgtgtgtgtg        60
     tgttagttag tgtgtcgtgt ttagattacg aaggttatgg ctttccaagg tcccagtagg       120
     acgttaactc aacagtcctc ggcggcgtcg tctgacgact tacagaagat attattcagc       180
     cccgatgcca tcaagaagat ggctactgag tgtgacctag gtcgacatca ttggatgcgc       240
     gcggataacg ccatctctgt cagacctctc gttccccaag taaccagtaa caatttattg       300
     tctttcttta aatctgggta tgatgccggt gaattgcgct ctaaaggcta tatgagcgtt       360
     cctcaagtgc tgtgtgccgt taccaggacg gtttctacgg atgctgaggg ttctttgaaa       420
     atttacttgg ctgacctagg tgataaagaa ttatccccaa ttgatggaca gtgtgttact       480
     ttacataatc atgagctccc tgctttgata tctttccaac ctacctacga ttgccccatg       540
     gaattagttg gcaatcggca tcgatgtttc gcggtagtcg ttgagagaca tggttatatt       600
     ggttacggtg gtaccactgc tagcgtgtgt agtaactggc aagctcagtt ttcttcaaag       660
     aataataatt acacacacgc cgctgctggt aagactcttg tgttgcctta caacagatta       720
     gctgagcatt cgaaaccgtc agccgtcgct cgcctgttga agtcgcagtt aaacaacgtt       780
     agctcatcgc gctatctttt gccgaacgtt gctcttaatc aaaatgcgtc tgggcacgag       840
     tccgagattt taaacgaaag ccctcccatc gctataggga gtccgtccgc gtcccgtaac       900
     aatagcttca gatcgcaggt ggttaacggt ctttagtgtt ttgttacgtt gtacctatgt       960
     atatatatac tacgtttatc ttccgtatgt aaatacatgt gagtctagag tcccgtgtga      1020
     gttgtaacgg tagacatctg tgacgcgaag ccgcttgaag atttcccatc tggggttagt      1080
     aagtccacat cacagtttta aggttcaatt ccttttgctc cctgttgggc cccttacttt      1140
     ctcatggatg cttctccgcg agttagcgtt tagttgttta cctgagtcgt gtgtttattt      1200
     gtatttattt cgcgtcttag tgtacctatg gacaaatctg gatctcccaa tgctagtaga      1260
     acctcccggc gtcgtcgccc gcgtagaggt tctcggtccg cttctggtgc ggatgcaggg      1320
     ttgcgtgctt tgactcagca gatgctgaaa ctcaataaaa ccctcgccat tggtcgtccc      1380
     actcttaacc acccaacctt cgtgggtagt gaaagctgta aacccggtta cactttcaca      1440
     tctattaccc tgaaaccgcc tgaaattgag aaaggttcat attttggtag aaggttgtct      1500
     ttgccagatt cagtcacgga ctatgataag aagcttgttt cgcgcattca aatcaggatt      1560
     aatcccttgc cgaaatttga ttctaccgtg tgggttacag ttcggaaagt accttcatca      1620
     tccgatcttt ccgtcgccgc catctctgct atgtttggcg atggtaattc accggttttg      1680
     gtttatcagt atgctgcgtc cggagttcag gccaacaata agttacttta tgacctgtcc      1740
     gagatgcgtg ctgatatcgg cgacatgcgt aagtacgccg tcctggttta ctcgaaagac      1800
     gataaactag agaaggacga gattgtactt catgtcgacg ttgagcatca acgaattcct      1860
     atctcacgga tgctcccgac ttagtccgtg tgtttaccgg cgtccgaaga cgttaaacta      1920
     cactctcaat cgcgagtgct gagttggtag tattgctcca aactacctga agtccctaaa      1980
     cgtgttgttg cgcggggaac gggttgtcca tccagcttac ggctaaaatg gtcagtcgtg      2040
     tctttcacac gccgatgtct tacaagatgt cgaggtaccc ttgaaatcat ctcctagatt      2100
     tcttcggaag ggcttcgtga gaagctcgtg cacggtaata cactgatatt accaagagtg      2160
     cgggtatcgc ctgtggtttt ccacaggttc tccataagga gacca                      2205
//