ID   AB162141; SV 1; circular; genomic DNA; STD; VRL; 2747 BP.
XX
AC   AB162141;
XX
DT   18-FEB-2004 (Rel. 78, Created)
DT   25-MAY-2007 (Rel. 91, Last updated, Version 2)
XX
DE   Tomato leaf curl Java virus-[Ageratum] DNA, complete genome.
XX
KW   .
XX
OS   Tomato leaf curl Java virus-[Ageratum]
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2747
RA   Ikegami M.;
RT   ;
RL   Submitted (09-FEB-2004) to the INSDC.
RL   Masato Ikegami, Graduate School of Agricultural Science, Tohoku University,
RL   Department of Life Science; 1-1 Tsutsumidori-Amamiyamachi, Aoba-ku, Sendai
RL   981-8555, Japan (E-mail:ikegami@bios.tohoku.ac.jp, Tel:81-22-717-8655,
RL   Fax:81-22-717-8659)
XX
RN   [2]
RX   DOI; 10.1007/s00705-006-0928-3.
RX   PUBMED; 17294343.
RA   Kon T., Kuwabara K., Hidayat S.H., Ikegami M.;
RT   "A begomovirus associated with Ageratum yellow vein disease in Indonesia:
RT   evidence for natural recombination between tomato leaf curl Java virus and
RT   Ageratum yellow vein virus-[Java]";
RL   Arch. Virol. 152(6):1147-1157(2007).
XX
DR   MD5; b3682270769b5f8348261ece8f4a52e1.
DR   EuropePMC; PMC2816314; 20104645.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2747
FT                   /organism="Tomato leaf curl Java virus-[Ageratum]"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:263577"
FT   CDS             130..480
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="V2"
FT                   /product="V2"
FT                   /db_xref="GOA:Q75QI7"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:Q75QI7"
FT                   /protein_id="BAD11107.1"
FT                   /translation="MWDPLVNEFPETVHGLRCMLSVKYLQLVEATYSPDTIGYDLVRDL
FT                   ISVIRARNYVEASRRYSHFHSRLEGTSPSELRHTRDEPCCCPHCPRHQQKKDMDQQAHV
FT                   SQAQTVQNVQKP"
FT   CDS             290..1063
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="V1"
FT                   /product="V1"
FT                   /db_xref="GOA:Q75QI6"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:Q75QI6"
FT                   /protein_id="BAD11108.1"
FT                   /translation="MSKRPADIVISTPASKVRRRLNFDTPAMSRAAAPTVLVTNKRRTW
FT                   TNRPMYRKPRLYRMYRSPDVPKGCEGPCKVQSFESRHDVSHVGKVCCITDVTRGLGLTH
FT                   RTGKRFCVKSVYIMGKVWMDENIKTKNHTNTVMFFLVRDRRPYSSPQDFGQVFNMYDNE
FT                   PSTATVKNDMRDRFQVLRKFSSTVTGGQYACKEQALVKRFFRVNNHVVYNHQEAGKYEN
FT                   HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN"
FT   CDS             complement(1060..1464)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="C3"
FT                   /product="C3"
FT                   /db_xref="GOA:Q75QI5"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:Q75QI5"
FT                   /protein_id="BAD11109.1"
FT                   /translation="MDFRTGELLTATQCESGVYTWTIKNPLYFKIIKHHERLFNTNNDV
FT                   ITIRIQFNHNLRKALGIHQCFLIFQIWTRLQPQTWRFLRVFRVQCMKYLDNLGVISINN
FT                   VIRSCDHVLWDVLEHTEYVTQSHIIKFNLY"
FT   CDS             complement(1205..1612)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="C2"
FT                   /product="C2"
FT                   /db_xref="GOA:Q75QI4"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:Q75QI4"
FT                   /protein_id="BAD11110.1"
FT                   /translation="MQNSSPSTAHCTQVPIKVQHRIAKKRPVRRRRVDLTCGCSYYFGI
FT                   DCANNGFSHRGITHCNSMREWRVYLDDQKSPLFQDNQAPREAIQHQQRRNNDPNTVQSQ
FT                   PEESVGNTPVFSDLPDLDSLTTSDLAFLKSI"
FT   CDS             complement(1518..2600)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="C1"
FT                   /product="C1"
FT                   /db_xref="GOA:Q75QI3"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:Q75QI3"
FT                   /protein_id="BAD11111.1"
FT                   /translation="MAPPKRFKIQAKNYFLTYPQCSLTKEEALSQIQALDTPTNKKYIK
FT                   ICRESHEDGSPHLHVLIQFEGKYVCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI
FT                   DKDGDTLEWGEFQIDGRSARGGQQTANDAYAQALNSGSKSEALNVIKELAPKDFVLQFH
FT                   NLNANLDRIFAPPLEVFVSPFLSSSFDQVPEELEEWVSENVRDAAARPWRPISIVIEGG
FT                   SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT                   QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNSALKEWALKNAEFVTLNSPL
FT                   YSGANQSPTQNSQEEASSQA"
FT   CDS             complement(2153..2443)
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="C4"
FT                   /product="C4"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:Q75QI2"
FT                   /protein_id="BAD11112.1"
FT                   /translation="MGALISTCLSSSKGNTSARITDSSTWYPQPGQHISIQTFRELNPA
FT                   PTSSPISTRTETLSNGENSRSTDDLQEGDNRQPMMLTPRHLTAAVSQRLLM"
XX
SQ   Sequence 2747 BP; 731 A; 569 C; 594 G; 853 T; 0 other;
     accggatggc cgcgattttt ttaaagtggt cccccccact aacaaatgtc ccccaatcag        60
     aacgcgccct caaagctaaa ttattaactg gtccctattt atacttggtt tccaagtatt       120
     attttaaaca tgtgggatcc actcgtaaac gaattcccag agactgtgca tggtctacgg       180
     tgtatgctat ccgtaaaata tcttcaatta gttgaagcta cgtattctcc tgatacgatt       240
     gggtacgatc ttgtacgcga tttaatttca gtaattcgtg ctcgcaatta tgtcgaagcg       300
     tcccgccgat atagtcattt ccactcccgc ctcgaaggta cgtcgccgtc tgaacttcga       360
     cacacccgcg atgagccgtg ctgctgcccc cactgtcctc gtcaccaaca aaagaaggac       420
     atggaccaac aggcccatgt atcgcaagcc cagactgtac agaatgtaca gaagccctga       480
     tgttcctaaa ggttgtgaag gcccatgtaa ggtccagtct tttgagtcta ggcatgatgt       540
     tagtcatgtg ggtaaggtct gttgtataac tgacgtcact aggggtttag gtttgacaca       600
     taggaccggt aagaggtttt gcgttaagtc agtctacata atgggcaagg tctggatgga       660
     tgagaatatc aagaccaaga atcacactaa cacagttatg ttttttctag ttcgtgatcg       720
     aagaccctat tcaagtcccc aggattttgg tcaggtgttt aacatgtatg acaatgagcc       780
     aagtacagct actgtcaaga acgatatgcg tgatcgtttt caggttttac ggaagttctc       840
     atcaactgtt actggtggtc agtatgcatg caaggagcag gctctcgtga agcgtttttt       900
     tagagttaat aatcatgtag tttataatca tcaagaggct ggaaagtatg agaaccatac       960
     tgagaacgct ctgttattgt atatggcttg tactcatgcc agtaacccag tgtatgctac      1020
     tttgaaaatc agaatctatt tctatgattc tgttcaaaat taataaagat taaattttat      1080
     tatatgagat tgtgttacat attctgtgtg ttccaataca tcccataaaa catgatcaca      1140
     tgatctaatt acattgttaa tactaattac tcccaaatta tctaaatact tcatacattg      1200
     aaccctaaat actcttaaga aacgccaagt ctgaggttgt aagcgagtcc agatctggaa      1260
     gatcagaaaa cactggtgta ttcccaacgc tttcctcagg ttgtgattga actgtattcg      1320
     gatcgttatt acgtcgttgt tggtgttgaa tagcctctcg tggtgcttga ttatcttgaa      1380
     atagagggga tttttgatcg tccaggtata cacgccactc tcgcattgag ttgcagtgag      1440
     taattcccct gtgcgaaaat ccattatttg cacagtctat gccgaagtag tatgaacacc      1500
     cgcacgttaa atcaactcta cgcctgcgaa ctggcctctt cttggctatt ctgtgttgga      1560
     ctttgattgg cacctgagta caatgggctg ttgagggtga cgaattctgc attctttaga      1620
     gcccactctt ttaatgccga attcttttct tcgtccaagt actctttata tgatgatgtt      1680
     gggcctggat tgcaaaggaa gatagttggg attccacctt taatttgaat tggtttcccg      1740
     tacttggtgt tgctttgcca gtctctttgg gcccccatga attctttaaa gtgctttagg      1800
     tagtgcgggt ctacgtcatc aatgacgtta taccaagcat cattactgta cacctttgga      1860
     ctcagatcta gatgaccgca cagataatta tgtggtccca gtgatctggc ccacattgtt      1920
     ttacccgtac gactaccacc ttctatcaca atactgatgg gtctccatgg ccgtgcagcg      1980
     gcatccctca cgttctcgga aacccattct tcaagttctt ccggaacttg atcgaatgaa      2040
     gaagacaaaa aaggactaac aaaaacctct aaaggaggtg caaaaatcct atctaaatta      2100
     gcatttaaat tatgaaattg taaaacaaaa tctttaggag ctagctcctt aattacatta      2160
     agagcctctg acttactgcc gctgttaagt gcctgggcgt aagcatcatt ggctgtctgt      2220
     tgtccccctc ttgcagatcg tccgtcgatc tggaattctc cccattcgag agtgtctccg      2280
     tccttgtcga tataggactt gacgtcggag ctggatttag ctccctgaat gtttggatgg      2340
     aaatgtgctg acctggttgg ggataccaag tcgaagaatc tgttattcgt gcagacgtat      2400
     ttcccttcga actggataag cacgtggaga tgagggctcc catcttcgtg ggattctctg      2460
     cagattttta tgtatttttt attagttggt gtatctaggg cttgaatttg ggaaagtgct      2520
     tcttctttgg tgagagaaca ttgtggataa gtgaggaaat aatttttggc ttgtatttta      2580
     aaacgttttg gaggagccat tgacttggtc aattggagac attcatagtt ctctggcaat      2640
     tggagacagg agacaatata taggtgtctc caaatggcat agttgtaatt tctcatagaa      2700
     attcaaaatt caagttgaaa tccaaaagcg gccatccgta taatatt                    2747
//