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ID AB162141; SV 1; circular; genomic DNA; STD; VRL; 2747 BP. XX AC AB162141; XX DT 18-FEB-2004 (Rel. 78, Created) DT 25-MAY-2007 (Rel. 91, Last updated, Version 2) XX DE Tomato leaf curl Java virus-[Ageratum] DNA, complete genome. XX KW . XX OS Tomato leaf curl Java virus-[Ageratum] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2747 RA Ikegami M.; RT ; RL Submitted (09-FEB-2004) to the INSDC. RL Masato Ikegami, Graduate School of Agricultural Science, Tohoku University, RL Department of Life Science; 1-1 Tsutsumidori-Amamiyamachi, Aoba-ku, Sendai RL 981-8555, Japan (E-mail:ikegami@bios.tohoku.ac.jp, Tel:81-22-717-8655, RL Fax:81-22-717-8659) XX RN [2] RX DOI; 10.1007/s00705-006-0928-3. RX PUBMED; 17294343. RA Kon T., Kuwabara K., Hidayat S.H., Ikegami M.; RT "A begomovirus associated with Ageratum yellow vein disease in Indonesia: RT evidence for natural recombination between tomato leaf curl Java virus and RT Ageratum yellow vein virus-[Java]"; RL Arch. Virol. 152(6):1147-1157(2007). XX DR MD5; b3682270769b5f8348261ece8f4a52e1. DR EuropePMC; PMC2816314; 20104645. XX FH Key Location/Qualifiers FH FT source 1..2747 FT /organism="Tomato leaf curl Java virus-[Ageratum]" FT /mol_type="genomic DNA" FT /db_xref="taxon:263577" FT CDS 130..480 FT /codon_start=1 FT /transl_table=1 FT /gene="V2" FT /product="V2" FT /db_xref="GOA:Q75QI7" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q75QI7" FT /protein_id="BAD11107.1" FT /translation="MWDPLVNEFPETVHGLRCMLSVKYLQLVEATYSPDTIGYDLVRDL FT ISVIRARNYVEASRRYSHFHSRLEGTSPSELRHTRDEPCCCPHCPRHQQKKDMDQQAHV FT SQAQTVQNVQKP" FT CDS 290..1063 FT /codon_start=1 FT /transl_table=1 FT /gene="V1" FT /product="V1" FT /db_xref="GOA:Q75QI6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q75QI6" FT /protein_id="BAD11108.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDTPAMSRAAAPTVLVTNKRRTW FT TNRPMYRKPRLYRMYRSPDVPKGCEGPCKVQSFESRHDVSHVGKVCCITDVTRGLGLTH FT RTGKRFCVKSVYIMGKVWMDENIKTKNHTNTVMFFLVRDRRPYSSPQDFGQVFNMYDNE FT PSTATVKNDMRDRFQVLRKFSSTVTGGQYACKEQALVKRFFRVNNHVVYNHQEAGKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT CDS complement(1060..1464) FT /codon_start=1 FT /transl_table=1 FT /gene="C3" FT /product="C3" FT /db_xref="GOA:Q75QI5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q75QI5" FT /protein_id="BAD11109.1" FT /translation="MDFRTGELLTATQCESGVYTWTIKNPLYFKIIKHHERLFNTNNDV FT ITIRIQFNHNLRKALGIHQCFLIFQIWTRLQPQTWRFLRVFRVQCMKYLDNLGVISINN FT VIRSCDHVLWDVLEHTEYVTQSHIIKFNLY" FT CDS complement(1205..1612) FT /codon_start=1 FT /transl_table=1 FT /gene="C2" FT /product="C2" FT /db_xref="GOA:Q75QI4" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q75QI4" FT /protein_id="BAD11110.1" FT /translation="MQNSSPSTAHCTQVPIKVQHRIAKKRPVRRRRVDLTCGCSYYFGI FT DCANNGFSHRGITHCNSMREWRVYLDDQKSPLFQDNQAPREAIQHQQRRNNDPNTVQSQ FT PEESVGNTPVFSDLPDLDSLTTSDLAFLKSI" FT CDS complement(1518..2600) FT /codon_start=1 FT /transl_table=1 FT /gene="C1" FT /product="C1" FT /db_xref="GOA:Q75QI3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q75QI3" FT /protein_id="BAD11111.1" FT /translation="MAPPKRFKIQAKNYFLTYPQCSLTKEEALSQIQALDTPTNKKYIK FT ICRESHEDGSPHLHVLIQFEGKYVCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAQALNSGSKSEALNVIKELAPKDFVLQFH FT NLNANLDRIFAPPLEVFVSPFLSSSFDQVPEELEEWVSENVRDAAARPWRPISIVIEGG FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNSALKEWALKNAEFVTLNSPL FT YSGANQSPTQNSQEEASSQA" FT CDS complement(2153..2443) FT /codon_start=1 FT /transl_table=1 FT /gene="C4" FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q75QI2" FT /protein_id="BAD11112.1" FT /translation="MGALISTCLSSSKGNTSARITDSSTWYPQPGQHISIQTFRELNPA FT PTSSPISTRTETLSNGENSRSTDDLQEGDNRQPMMLTPRHLTAAVSQRLLM" XX SQ Sequence 2747 BP; 731 A; 569 C; 594 G; 853 T; 0 other; accggatggc cgcgattttt ttaaagtggt cccccccact aacaaatgtc ccccaatcag 60 aacgcgccct caaagctaaa ttattaactg gtccctattt atacttggtt tccaagtatt 120 attttaaaca tgtgggatcc actcgtaaac gaattcccag agactgtgca tggtctacgg 180 tgtatgctat ccgtaaaata tcttcaatta gttgaagcta cgtattctcc tgatacgatt 240 gggtacgatc ttgtacgcga tttaatttca gtaattcgtg ctcgcaatta tgtcgaagcg 300 tcccgccgat atagtcattt ccactcccgc ctcgaaggta cgtcgccgtc tgaacttcga 360 cacacccgcg atgagccgtg ctgctgcccc cactgtcctc gtcaccaaca aaagaaggac 420 atggaccaac aggcccatgt atcgcaagcc cagactgtac agaatgtaca gaagccctga 480 tgttcctaaa ggttgtgaag gcccatgtaa ggtccagtct tttgagtcta ggcatgatgt 540 tagtcatgtg ggtaaggtct gttgtataac tgacgtcact aggggtttag gtttgacaca 600 taggaccggt aagaggtttt gcgttaagtc agtctacata atgggcaagg tctggatgga 660 tgagaatatc aagaccaaga atcacactaa cacagttatg ttttttctag ttcgtgatcg 720 aagaccctat tcaagtcccc aggattttgg tcaggtgttt aacatgtatg acaatgagcc 780 aagtacagct actgtcaaga acgatatgcg tgatcgtttt caggttttac ggaagttctc 840 atcaactgtt actggtggtc agtatgcatg caaggagcag gctctcgtga agcgtttttt 900 tagagttaat aatcatgtag tttataatca tcaagaggct ggaaagtatg agaaccatac 960 tgagaacgct ctgttattgt atatggcttg tactcatgcc agtaacccag tgtatgctac 1020 tttgaaaatc agaatctatt tctatgattc tgttcaaaat taataaagat taaattttat 1080 tatatgagat tgtgttacat attctgtgtg ttccaataca tcccataaaa catgatcaca 1140 tgatctaatt acattgttaa tactaattac tcccaaatta tctaaatact tcatacattg 1200 aaccctaaat actcttaaga aacgccaagt ctgaggttgt aagcgagtcc agatctggaa 1260 gatcagaaaa cactggtgta ttcccaacgc tttcctcagg ttgtgattga actgtattcg 1320 gatcgttatt acgtcgttgt tggtgttgaa tagcctctcg tggtgcttga ttatcttgaa 1380 atagagggga tttttgatcg tccaggtata cacgccactc tcgcattgag ttgcagtgag 1440 taattcccct gtgcgaaaat ccattatttg cacagtctat gccgaagtag tatgaacacc 1500 cgcacgttaa atcaactcta cgcctgcgaa ctggcctctt cttggctatt ctgtgttgga 1560 ctttgattgg cacctgagta caatgggctg ttgagggtga cgaattctgc attctttaga 1620 gcccactctt ttaatgccga attcttttct tcgtccaagt actctttata tgatgatgtt 1680 gggcctggat tgcaaaggaa gatagttggg attccacctt taatttgaat tggtttcccg 1740 tacttggtgt tgctttgcca gtctctttgg gcccccatga attctttaaa gtgctttagg 1800 tagtgcgggt ctacgtcatc aatgacgtta taccaagcat cattactgta cacctttgga 1860 ctcagatcta gatgaccgca cagataatta tgtggtccca gtgatctggc ccacattgtt 1920 ttacccgtac gactaccacc ttctatcaca atactgatgg gtctccatgg ccgtgcagcg 1980 gcatccctca cgttctcgga aacccattct tcaagttctt ccggaacttg atcgaatgaa 2040 gaagacaaaa aaggactaac aaaaacctct aaaggaggtg caaaaatcct atctaaatta 2100 gcatttaaat tatgaaattg taaaacaaaa tctttaggag ctagctcctt aattacatta 2160 agagcctctg acttactgcc gctgttaagt gcctgggcgt aagcatcatt ggctgtctgt 2220 tgtccccctc ttgcagatcg tccgtcgatc tggaattctc cccattcgag agtgtctccg 2280 tccttgtcga tataggactt gacgtcggag ctggatttag ctccctgaat gtttggatgg 2340 aaatgtgctg acctggttgg ggataccaag tcgaagaatc tgttattcgt gcagacgtat 2400 ttcccttcga actggataag cacgtggaga tgagggctcc catcttcgtg ggattctctg 2460 cagattttta tgtatttttt attagttggt gtatctaggg cttgaatttg ggaaagtgct 2520 tcttctttgg tgagagaaca ttgtggataa gtgaggaaat aatttttggc ttgtatttta 2580 aaacgttttg gaggagccat tgacttggtc aattggagac attcatagtt ctctggcaat 2640 tggagacagg agacaatata taggtgtctc caaatggcat agttgtaatt tctcatagaa 2700 attcaaaatt caagttgaaa tccaaaagcg gccatccgta taatatt 2747 //