ID AB162006; SV 1; linear; genomic RNA; STD; VRL; 6512 BP. XX AC AB162006; XX DT 01-APR-2005 (Rel. 83, Created) DT 20-DEC-2005 (Rel. 86, Last updated, Version 2) XX DE Kyuri green mottle mosaic virus genomic RNA, complete genome, isolate:YM. XX KW . XX OS Kyuri green mottle mosaic virus OC Viruses; Riboviria; Virgaviridae; Tobamovirus. XX RN [1] RP 1-6512 RA Daryono B.S., Somowiyarjo S., Natsuaki K.T.; RT ; RL Submitted (05-FEB-2004) to the INSDC. RL Keiko T Natsuaki, Tokyo University of Agriculture, Graduate School of RL Agriculture, Dept. of International Agricultural Development; 1-1-1 RL Sakuragaoka, Setagaya, Tokyo 156-8502, JAPAN (E-mail:keiko@nodai.ac.jp, RL Tel:81-3-5477-2412, Fax:81-3-5477-4032) XX RN [2] RX DOI; 10.1111/j.1439-0434.2005.01024.x. RX AGRICOLA; IND43756432. RA Daryono B.S., Somowiyarjo S., Natsuaki K.T.; RT "Biological and molecular characterization of melon-infecting kyuri green RT mottle mosaic virus in Indonesia"; RL J. Phytopathol. 153(10):588-595(2005). XX DR MD5; 45d5ec8b2e4aa5fa83e7159a75353168. DR RFAM; RF01072; TMV_UPD-PK3. XX FH Key Location/Qualifiers FH FT source 1..6512 FT /organism="Kyuri green mottle mosaic virus" FT /isolate="YM" FT /mol_type="genomic RNA" FT /country="Indonesia:Central Java, Klaten, Wedi village" FT /db_xref="taxon:111970" FT 5'UTR 1..57 FT /note="Non-coding region" FT CDS 58..5070 FT /codon_start=1 FT /transl_table=1 FT /transl_except=(pos:3556..3558,aa:OTHER) FT /product="RNA replicase" FT /note="189.1K protein" FT /note="readthrough product (premature stop codon at FT 3556...3558)" FT /db_xref="GOA:Q589Z9" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q589Z9" FT /protein_id="BAD93195.1" FT /translation="MANITQQIIDTREAAAAGRNPLIAQLASKRVYDEAVKSLDTQDKR FT PKVNFSRVLSTEQMRVVTENYPEFSVSYTGSALSVHSLAGGLRYLEGEYLMMQVPYGPP FT CYDIGGNYSQHMLKGRSYVHCCNPCLDLKDVARNEMYKDAIERYVTKKRDGPRSVAWRS FT QAESSQETKFAGLPSWQMDAFRRYHSDPSSVTRSEVFQQCEHQFSRGGDRYAVALHSIY FT EVPCQQKGPALLKKNIKVLFAAFHFSEDLLIGSEYGRLPNVGAFFSVDGDSVNFQFEDE FT STLHYTHSFSNIRKIVTRTFFPASDRVVYVKEFMVKRVDTFFFRMVRVDTHMLHKSVGQ FT YQVSKNDYYSLKSSPVFQDKATFSVWFPQAKSKVVIPVFEMRGFFSGTLKSKKMLVDAT FT FIHTVINHICTYDNKALTWRNVQAFVESIRSRVVVNGVSVRSEWDVPIEMLCDISFTAF FT LLVKVKKAQIEIMSEKTVTPAQGLLERLAKKISGTFRVHRTIIHAALSSTGWFRCQADE FT LVVEAPELFMDFHDFLSAALEADAKIEAANVESVLDASDRLYTTVNELCERYSGIEFDL FT EKFTDFCHHHDVNPSLIGTVIEAIFSQSAGITVTGLQAKSPEWAAAEALAPVDDDMDCS FT SDEEDFFDPKFPGLSAEEQRYLREVRTKEASFIELQDAFQRKAVTETVTVGVGALPTLP FT KQWIAKGKAHLPQVGYSVGKNKHYTDFNDDDIVAVRKIHLMETCNLRLKKTITPVIYTG FT PIRVRQMANYLDYLSASLTATIGNLERIVRSSWTGENELVQTYGLFDCQADKWILQPTE FT RTHSWGVCLTMDDKLRIVVLQYDQFIGPIVDKSSWKAFCVSADTKVFSEIRSLKVLPSL FT LFQDPTATFTLIDGVPGCGKTQEIINSADFKTDLILTPGKESAPMIRRRANAKFRGCVA FT TNDNVRTFDSFVMNQKPFTFKTLWVDEGLMVHTGLLNFCVNISKVKEVKIFGDTKQIPF FT INRVMNFDYPLELKKIIVDKVEKRYTSKRCPRDVTHYLNEVYAAPVTTSSAVVHSVSQK FT KIAGVGLLRPELTSLEGKIITFTQSDKQTLLKAGYEDVNTVHEVQGETYECTSVVRATA FT TPIGFISRKSPHVLVALSRHTKTMTYYTVTVDPVSCIIADLEKVDQSILSMYATVASTK FT XQLQQMSFQITENVFLPVSKAGFWTDMQSFYDACLPGNSFVLNDYDSVTMRLADNEFNL FT QPCRLTLSKADPVAESLKLERKNFLVPSLKTATERPRIPGFLENLVAIVKRNFNTPDLA FT GTLDIDTISKSVVDNFFTTFLRDEQLCDHLVRVRSLSFECFSAWFDNQATAAMGQLATF FT DFADLPPVDMYTHMIKRQPKSKLDTSIQSEYPALQTTVYQSKSVNTVFDHHFRSLTSES FT LSSRYNWQYLVYTGKTLEDLQSFFSTKSAYDHNVILMLDVSKYNESQTDFHQAAERLTW FT ERVGFGDILAMSWKMGYKNTNKSDFQAAIKMSIHFQMRSGDVPIFIYKTYIITACIDSM FT EALGKCSTASICGDDSNIYMPSDQESRDIKATANLVWNFEAKLFKKRYRYFCGKYVIHH FT SKGCIVYPDPLKLISKLGNKSLESYEHLQEFRISLMDVAKPLFNAAYFHLLDDAIHEYF FT PSVGGSSFAINSLCKYLSDKWLFRSLFSKSVV" FT CDS 58..3558 FT /codon_start=1 FT /transl_table=1 FT /product="RNA replicase" FT /note="131.5K protein" FT /db_xref="GOA:Q589Z8" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q589Z8" FT /protein_id="BAD93196.1" FT /translation="MANITQQIIDTREAAAAGRNPLIAQLASKRVYDEAVKSLDTQDKR FT PKVNFSRVLSTEQMRVVTENYPEFSVSYTGSALSVHSLAGGLRYLEGEYLMMQVPYGPP FT CYDIGGNYSQHMLKGRSYVHCCNPCLDLKDVARNEMYKDAIERYVTKKRDGPRSVAWRS FT QAESSQETKFAGLPSWQMDAFRRYHSDPSSVTRSEVFQQCEHQFSRGGDRYAVALHSIY FT EVPCQQKGPALLKKNIKVLFAAFHFSEDLLIGSEYGRLPNVGAFFSVDGDSVNFQFEDE FT STLHYTHSFSNIRKIVTRTFFPASDRVVYVKEFMVKRVDTFFFRMVRVDTHMLHKSVGQ FT YQVSKNDYYSLKSSPVFQDKATFSVWFPQAKSKVVIPVFEMRGFFSGTLKSKKMLVDAT FT FIHTVINHICTYDNKALTWRNVQAFVESIRSRVVVNGVSVRSEWDVPIEMLCDISFTAF FT LLVKVKKAQIEIMSEKTVTPAQGLLERLAKKISGTFRVHRTIIHAALSSTGWFRCQADE FT LVVEAPELFMDFHDFLSAALEADAKIEAANVESVLDASDRLYTTVNELCERYSGIEFDL FT EKFTDFCHHHDVNPSLIGTVIEAIFSQSAGITVTGLQAKSPEWAAAEALAPVDDDMDCS FT SDEEDFFDPKFPGLSAEEQRYLREVRTKEASFIELQDAFQRKAVTETVTVGVGALPTLP FT KQWIAKGKAHLPQVGYSVGKNKHYTDFNDDDIVAVRKIHLMETCNLRLKKTITPVIYTG FT PIRVRQMANYLDYLSASLTATIGNLERIVRSSWTGENELVQTYGLFDCQADKWILQPTE FT RTHSWGVCLTMDDKLRIVVLQYDQFIGPIVDKSSWKAFCVSADTKVFSEIRSLKVLPSL FT LFQDPTATFTLIDGVPGCGKTQEIINSADFKTDLILTPGKESAPMIRRRANAKFRGCVA FT TNDNVRTFDSFVMNQKPFTFKTLWVDEGLMVHTGLLNFCVNISKVKEVKIFGDTKQIPF FT INRVMNFDYPLELKKIIVDKVEKRYTSKRCPRDVTHYLNEVYAAPVTTSSAVVHSVSQK FT KIAGVGLLRPELTSLEGKIITFTQSDKQTLLKAGYEDVNTVHEVQGETYECTSVVRATA FT TPIGFISRKSPHVLVALSRHTKTMTYYTVTVDPVSCIIADLEKVDQSILSMYATVASTK FT " FT CDS 5073..5861 FT /codon_start=1 FT /transl_table=1 FT /product="movement protein" FT /note="28K protein" FT /db_xref="GOA:Q589Z7" FT /db_xref="InterPro:IPR001022" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:Q589Z7" FT /protein_id="BAD93197.1" FT /translation="MSVSSVGVKNALKPQEFVKLSWVDKVLPDMFTVFRYLSVTDYSVI FT KSRDSECLIPVDLLRGVDLSKSKYVTLVGVVISGVWTIPENCAGGATVALVDTRMSMVD FT EGTICKFSVAASTRDFMVKLIPNYYVTASDASSKPWSIFVRVSGVRIKEGFSPLTLEIA FT SLVATTNSILKKGLRVSVLESVVGSDASINLESVSDKVQPFFDSVPITAAVIARDRSYV FT SKSGPGRAVRQRAPSKSEKKGDAVTAESMSDGDALESPSS" FT CDS 5866..6351 FT /codon_start=1 FT /transl_table=1 FT /product="coat protein" FT /note="17.2K protein" FT /db_xref="GOA:Q589Z6" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:Q589Z6" FT /protein_id="BAD93198.1" FT /translation="MSYSISGVRSLPAFAKSFYPFYDLYNLLVKAQGGALQTQNGKDIV FT RESLTGLLTSVASLNTRFPANEFFVWSRESRVAAVIDSLLSALDSRNRAIEVENPSNPS FT TGEALNATKRNDDASTAAHNDIPLLLAALNDGVGVFDSASFESAFGLVWTASATSSK" FT 3'UTR 6352..6512 FT /note="Non-coding region" XX SQ Sequence 6512 BP; 1655 A; 1400 C; 1551 G; 1906 T; 0 other; gaaagcatta cattaaacat acaaagttta attacaatca cttttatcta caatgttatg 60 gcaaacatta cacaacaaat tattgataca agagaggctg ctgccgctgg acggaatccg 120 ttgatagcgc agttagcctc aaagagggtt tatgacgagg ctgtaaagtc tctggacaca 180 caagacaaac gccctaaggt gaacttttca agagtgcttt ccacggagca gatgcgtgta 240 gtgaccgaaa attatcctga attttcagtt tcttacacag gctctgcctt atctgtacat 300 tccctcgcgg gagggttgag gtacttagaa ggggaatacc tcatgatgca ggtgccgtac 360 ggtccgccgt gctacgatat cggaggaaat tattcccaac acatgttgaa ggggaggtca 420 tacgtgcatt gctgtaaccc ctgcttagat ttgaaggacg ttgcacgcaa tgaaatgtac 480 aaggatgcga tcgaacgata tgtcacgaag aagagagacg gaccccgctc tgttgcatgg 540 cgctctcaag ctgaatcgtc gcaagagacg aaatttgccg gactgccttc ctggcaaatg 600 gacgcattcc gaaggtacca ctcggaccca agttctgtca cccggtccga agtttttcag 660 caatgtgagc accaattttc acgaggcgga gaccggtatg ctgtggctct ccattccatt 720 tatgaagttc cctgccagca aaaagggcct gctcttctta agaaaaacat caaggttctc 780 ttcgctgctt tccacttttc ggaagacctg ttaataggga gcgagtacgg acgtttaccc 840 aacgttggtg ctttcttttc tgttgacggc gactccgtca atttccagtt cgaagacgaa 900 tctactttac attacacgca tagtttttca aatattagga aaattgtaac taggactttt 960 ttccctgctt ctgatagagt agtttatgtt aaagagttta tggttaagcg tgtagatacc 1020 tttttcttta ggatggttag agtagatacg catatgttgc acaaatccgt aggccaatac 1080 caagtttcca agaacgacta ttactctctt aaatcttcgc cggtctttca agataaagcc 1140 acgttttctg tgtggtttcc acaagctaag tccaaagtag taatcccggt gttcgagatg 1200 cggggttttt tctctggcac cttaaagtca aaaaagatgt tagtagatgc aacgtttatt 1260 cacacggtga tcaaccacat ctgcacctat gacaacaaag cgttgacgtg gcggaatgtc 1320 caagctttcg tcgaatcaat tcgttctagg gtagttgtga acggagtttc ggtacgtagt 1380 gaatgggatg tacccatcga gatgctttgc gacatttcct ttaccgcctt tcttttggtc 1440 aaggttaaga aagcacagat tgagatcatg agcgaaaaga cggtgacgcc agcgcaggga 1500 cttttagagc gacttgccaa aaagatttct ggaactttca gggtgcacag gacaatcatc 1560 catgccgcat tatcgtccac cggatggttc agatgccagg ctgacgagtt ggtcgtagaa 1620 gcccctgaac tgttcatgga ctttcatgat tttctttctg ctgctctcga agccgacgcc 1680 aagatagagg cggctaatgt cgaaagtgtt ctggatgctt ccgacagact gtacactacg 1740 gtcaacgaac tctgcgaacg ctactctggg atagagtttg atttggagaa atttacggat 1800 ttctgccacc atcatgatgt caacccgagc ctaattggaa ccgtcataga ggcgattttt 1860 tcgcaatctg ctgggatcac agtcacaggc ctgcaagcaa agtcacccga atgggcggct 1920 gcagaagcct tggcccccgt ggatgacgac atggattgct catcggatga agaagacttt 1980 tttgacccca agttcccggg actgtccgct gaggagcaga gatacttgag agaagttagg 2040 actaaagagg cctcctttat cgaattgcaa gatgcgttcc agcgcaaggc ggtcacggaa 2100 accgtcaccg ttggtgtcgg cgccctgcca actttgccta aacaatggat cgcgaaaggt 2160 aaggctcatc ttcctcaggt aggttattcg gtgggaaaga ataagcatta caccgatttc 2220 aatgacgacg atatagtagc cgtgaggaag atccatttaa tggaaacttg caacctgaga 2280 ctcaagaaga ctatcacgcc tgtgatctat actggcccaa tccgtgtgag acagatggcg 2340 aactatctag actacctttc tgctagctta accgctacga taggcaatct ggaaaggatt 2400 gtccggtctt catggactgg cgagaacgaa ttggtgcaga cctacggtct gttcgactgt 2460 caggctgata agtggatttt gcaacccacg gagcgaaccc attcttgggg cgtgtgtttg 2520 accatggatg acaagttaag aatcgtggtg ttgcaatatg accagttcat tgggccaata 2580 gttgataagt cttcctggaa ggctttctgc gtttctgctg atactaaggt tttctctgaa 2640 attaggagtt taaaagtcct tccctccctc ctttttcaag acccgactgc aactttcact 2700 ctgattgatg gtgttcctgg atgtggtaag acccaagaaa taatcaactc cgctgacttt 2760 aaaactgatt tgatccttac acctggtaag gaatctgcgc cgatgattcg gaggcgtgct 2820 aacgccaagt tcagaggttg cgtcgcaacc aatgacaacg tgcgcacctt cgattctttc 2880 gttatgaatc agaaaccttt caccttcaaa accctatggg ttgatgaagg gttgatggtt 2940 cataccgggc tgttgaactt ctgtgtcaat atttccaaag tcaaggaggt gaagattttt 3000 ggggacacca aacaaattcc gttcatcaat cgggtgatga attttgacta cccgttagaa 3060 ttgaagaaaa taattgttga taaggtcgag aaacggtaca ccagcaaacg gtgtcctcgc 3120 gatgtgacgc actacctcaa tgaggtgtac gccgcacctg tgacgacatc gagtgctgtt 3180 gtgcactcag tctcgcaaaa gaagattgcg ggtgtgggct tgttacgtcc cgagttaacc 3240 agtctcgagg gaaagattat cacttttact cagagtgata agcagaccct tttaaaggct 3300 ggttatgagg acgtaaacac agtccacgaa gtccaaggag agacatacga atgcacttct 3360 gtggtgcggg caactgctac gcctataggc ttcatatccc gaaagtcacc gcacgtgctg 3420 gtagcgctct ctcgtcatac caagactatg acgtattata ccgtcactgt cgatcctgta 3480 agctgtataa ttgctgatct cgaaaaggtc gatcaaagca tcttatccat gtacgctact 3540 gtagcgtcta ccaaatagca attacagcaa atgtcgttcc aaataaccga aaatgtattc 3600 ttgcccgtgt ctaaagcggg tttttggacc gacatgcagt ccttttacga cgcgtgcctg 3660 cctggaaaca gttttgtgct caacgactac gactctgtaa ccatgcggtt ggccgacaac 3720 gaattcaatt tacaaccttg tagattgact ttgtctaagg ctgacccggt tgcagagtcg 3780 ttgaaattgg aaaggaagaa ttttctggtt ccttccctta aaactgctac ggaaaggccg 3840 cgtattcctg gtttcttaga aaatttagta gctatagtta agcgtaattt taatactccg 3900 gacttagccg ggactttaga tatagatact attagtaaga gtgttgtaga taatttcttt 3960 actacttttc ttagggatga gcaattgtgt gatcacttag tacgtgtgcg gtctcttagt 4020 tttgagtgtt tttctgcttg gttcgataat caggccacgg ctgctatggg gcagttggca 4080 acttttgatt tcgcggactt gccgccagtc gatatgtata cgcatatgat caagcgacag 4140 ccaaagtcga aattagatac cagcatccag tctgagtatc cagccttgca gactacagtt 4200 tatcaatcta agtcagttaa taccgtcttc gaccatcatt ttaggtcttt aactagtgag 4260 tcactgagtt cgagatataa ctggcagtat ttagtttata ctgggaaaac cctggaagat 4320 ttgcaatctt tcttctctac taagtctgca tacgatcata acgtaatcct gatgttagac 4380 gtgtctaaat acaatgagtc tcagactgac tttcatcagg ctgctgagag attgacctgg 4440 gaaagagtgg gtttcggcga cattctagcg atgagctgga agatgggcta taaaaatacc 4500 aacaaatcgg acttccaagc cgctattaag atgtcgatcc actttcagat gagatctggg 4560 gacgttccta tctttatata caaaacttac attatcacag cgtgtataga ttctatggaa 4620 gctttaggga aatgttcgac tgcctctatc tgtggtgatg attcgaatat ctacatgccg 4680 tctgaccaag agtcacgcga catcaaagct actgccaatt tagtctggaa tttcgaggct 4740 aagttgttta agaaaaggta taggtacttt tgtggtaagt atgtcattca ccactctaag 4800 ggctgtattg tatatcctga ccctttaaag ttaatttcta aattaggtaa taagagtcta 4860 gaaagttacg aacatttgca ggaatttagg atttctctga tggacgtggc taaacctttg 4920 tttaatgccg cttattttca ccttttagat gatgctatcc acgagtattt tcctagcgta 4980 gggggtagca gttttgctat caattctttg tgcaagtacc ttagtgataa gtggttgttt 5040 agatctcttt tttcaaagtc tgttgtttag atatgtctgt cagtagtgtg ggtgtcaaga 5100 atgccttgaa gccacaggag tttgtaaaac tctcatgggt ggacaaggtt cttcctgaca 5160 tgtttactgt tttccgttat ctttccgtta ctgactatag tgtaattaaa tctagagatt 5220 ctgagtgttt aattcccgtt gatttgttgc gtggtgtcga cttgtccaag tcaaagtatg 5280 ttactttagt gggtgttgtc atctcaggcg tctggacgat acctgagaat tgcgctggcg 5340 gagctaccgt ggcgctagtc gacaccagga tgtcgatggt agacgaggga accatttgca 5400 agttctccgt cgctgcttcg acgcgtgatt ttatggttaa gttgatacct aactattacg 5460 tcactgcttc ggatgcatcc tcgaaaccct ggtctatatt tgtcagagtg tctggtgtgc 5520 gtatcaagga aggtttctct ccgctcacgc tggagattgc ctccttagtc gctactacta 5580 attctatttt aaagaagggt ctccgtgtta gcgttttaga atctgtcgtc gggtcggacg 5640 cctctattaa tttggaatcc gtttcggata aggttcaacc tttcttcgat tcggtcccaa 5700 ttacggcggc tgtcattgct cgcgataggt cttatgtttc taagtcaggt cctggtcgtg 5760 ctgtacggca aagggccccg tctaaaagcg aaaagaaagg ggatgcagtt actgctgaga 5820 gtatgtcgga tggcgatgct ttggaatcgc ccagttcata acaagatgtc ttactcgatc 5880 agtggtgttc gttcgcttcc tgctttcgct aagtcctttt atccttttta tgatttgtat 5940 aatttgttag ttaaagccca aggaggtgct cttcaaacgc agaatggtaa agacattgtg 6000 cgcgagtccc tcactgggtt gttaacttct gttgcgtctc taaatacacg ttttcctgct 6060 aatgagtttt tcgtgtggtc tcgtgagtcg cgcgttgctg ctgtgatcga ttctttgtta 6120 tccgcattgg attctagaaa tagggctatc gaagttgaaa acccctctaa tccttctact 6180 ggagaagctt tgaatgcgac taagcgcaat gacgacgcgt ctacagccgc acacaacgac 6240 attcctctgc tgttagcagc tttgaatgac ggtgtgggcg tttttgatag tgcgtctttt 6300 gagtcagctt tcggtcttgt ttggaccgca agcgccactt cctcaaagtg aggcgtgggg 6360 gttacgataa accctagagt ttttccctcc tcttaaatcg aagggcttcc ttacgcggtt 6420 tctaccgaac ctctatcgtg tgacgatatg ttggcgtaag tttgatggga gaggtgttcg 6480 aatcaccccc tttgtcctgg gtaaggaccc ca 6512 //