ID   AB127935; SV 1; linear; genomic RNA; STD; VRL; 1379 BP.
XX
AC   AB127935;
XX
DT   03-DEC-2004 (Rel. 82, Created)
DT   14-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Papaya ringspot virus gene for polyprotein, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1379
RA   Natsuaki T., Ali A.;
RT   ;
RL   Submitted (03-DEC-2003) to the INSDC.
RL   Tomohide Natsuaki, Utsunomiya University, Faculty of Agriculture;
RL   Mine-machi 350, Utsunomiya, Tochigi, 321-8505, Japan
RL   (E-mail:natsuaki@cc.utsunomiya-u.ac.jp, Tel:81-28-649-5449,
RL   Fax:81-28-649-5401)
XX
RN   [2]
RX   DOI; 10.1111/j.1439-0434.2004.00915.x.
RX   AGRICOLA; IND43670294.
RA   Ali A., Natsuaki T., Okuda S.;
RT   "Identification and molecular characterization of viruses infecting
RT   cucurbits in Pakistan";
RL   J. Phytopathol. 152(11-1):677-682(2004).
XX
DR   MD5; 450f221cfd45b0a985395d6a479bea7d.
DR   EuropePMC; PMC2429970; 18575612.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1379
FT                   /organism="Papaya ringspot virus"
FT                   /isolate="Pak"
FT                   /mol_type="genomic RNA"
FT                   /country="Pakistan"
FT                   /isolation_source="lageneria siceneria"
FT                   /db_xref="taxon:12205"
FT   CDS             <1..1170
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q5R2F0"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q5R2F0"
FT                   /protein_id="BAD74200.1"
FT                   /translation="GYEELTDQIRKFYQWVLEQAPYNELDDEKAPYVSELGLRRLYTST
FT                   RGSCAELEVYLSKYFEDESGDTPELVVYHESVNPIKQTMASLQGKNVFYQSKDGAVDAG
FT                   VNAKLKEKEEKEKEKEKEKEKEKEKEKEKVKDEPETSKQDLNSGTERERDRDVNAGTMG
FT                   SFTVPRIKTFTDKMVLPKFQGKTVLNLNHLIQYNPQQIDISNTRATQNQFDKWYEGVRS
FT                   DYGLTDNEMQVMLNGLMVWCIENGTSPDVSGVWVMMDGDTQVDYPIKPLIEHATPTFRQ
FT                   IMAHFSNAAEAYIAKRNATERYMPRYGLKRNLTDISLARYAFDFYEINSKTPDRAREAH
FT                   MQMKAAALRNANRRLFGIDGSVSNREENTERHTVEDVDRDMHSLLGMRK"
FT   mat_peptide     <1..225
FT                   /product="nuclear inclusion protein b"
FT   mat_peptide     226..1167
FT                   /product="coat protein"
FT   3'UTR           1171..1379
XX
SQ   Sequence 1379 BP; 452 A; 267 C; 331 G; 329 T; 0 other;
     ggctatgaag aactaacaga ccaaattcgg aagttctacc aatgggttct agaacaagct        60
     ccatacaatg agcttgacga cgagaaagca ccatacgtct ctgaacttgg tcttaggagg       120
     ttgtatacta gcactcgcgg atcctgtgcg gagttagaag tgtacctctc aaaatatttt       180
     gaagatgaga gtggtgacac accagagctc gtggtttatc atgagtctgt gaacccaatt       240
     aagcagacta tggcctcact gcaaggcaag aatgtgttct atcaatcaaa agatggcgct       300
     gtggatgctg gtgtcaatgc taagttaaaa gaaaaggaag aaaaagagaa agagaaagaa       360
     aaggaaaaag agaaagaaaa ggaaaaagaa aaagagaagg tgaaagatga acctgaaaca       420
     tccaaacaag atctgaattc aggtacggaa agggagagag atcgagatgt caatgctggg       480
     acaatgggga gttttactgt tccccgaatt aaaacattca ctgataagat ggttttaccg       540
     aagttccaag gaaagactgt tttgaacttg aaccacttga ttcagtacaa tccgcagcaa       600
     atagatatct caaatacacg tgccactcaa aatcagtttg acaaatggta cgaaggcgtg       660
     cgtagtgact acgggcttac tgataacgaa atgcaggtga tgttgaatgg actaatggtt       720
     tggtgcattg aaaacggcac atctcccgac gtatctggcg tctgggtcat gatggatggc       780
     gacactcaag tcgactatcc tattaaacca ttaatcgaac acgcaacacc aacatttcgt       840
     cagattatgg cacactttag caacgcagcc gaggcataca ttgcaaagag gaatgcgaca       900
     gaacgataca tgcctcgtta tggtttaaag cgaaacttga ctgacataag cctcgctaga       960
     tatgccttcg atttctatga gatcaattca aaaactcctg atcgagcacg tgaagctcat      1020
     atgcagatga aggcagcggc cctccgcaac gccaacaggc gtttatttgg aatagacggt      1080
     agcgtcagta acagggaaga gaacacggag agacacactg ttgaggatgt tgatcgcgac      1140
     atgcactctc tccttggaat gcgcaagtga tgttggctgg gctggcttag ccgtgttccc      1200
     cctatagtat aagtaaccgt atctaatagt gtggtcttac caccgtattt acgtttcagt      1260
     gagggtggcc ctccttgttg cttatattat tcgagttctc taagctttgt ttcagtgtgg      1320
     gcgtcccacg tgtactcaaa tcttttagaa tgagagaaaa aaaaaaaaaa aaaaaaaaa       1379
//