ID AB113348; SV 1; linear; genomic RNA; STD; VRL; 2279 BP. XX AC AB113348; XX DT 07-MAY-2005 (Rel. 83, Created) DT 27-JAN-2009 (Rel. 99, Last updated, Version 3) XX DE Rosellinia necatrix partitivirus 1-W8 genomic RNA segment 2, complete DE genome. XX KW . XX OS Rosellinia necatrix partitivirus 1-W8 OC Viruses; Riboviria; Partitiviridae; Betapartitivirus. XX RN [1] RP 1-2279 RA Sasaki A., Yoshida K.; RT ; RL Submitted (26-JUN-2003) to the INSDC. RL Contact:Atsuko Sasaki National institute of Fruit tree Science, Nationa RL Agricultural Research Organization, Independent Administrative RL Institution, Lab. Plant Protection; Fujimoto 2, Tsukuba, Ibaragi 305-8605, RL Japan XX RN [2] RX DOI; 10.1007/s00705-005-0494-0. RX PUBMED; 15750865. RA Sasaki A., Miyanishi M., Ozaki K., Onoue M., Yoshida K.; RT "Molecular characterization of a partitivirus from the plant pathogenic RT ascomycete Rosellinia necatrix"; RL Arch. Virol. 150(6):1069-1083(2005). XX DR MD5; 1e6019af26ff3463e3bde174e07c9d2f. DR EuropePMC; PMC4886788; 27030271. DR EuropePMC; PMC5874917; 29559577. XX FH Key Location/Qualifiers FH FT source 1..2279 FT /organism="Rosellinia necatrix partitivirus 1-W8" FT /segment="2" FT /host="Rosellinia necatrix isolate W8" FT /mol_type="genomic RNA" FT /country="Japan:Okayama" FT /isolation_source="diseased root of grapevine" FT /note="Attached polyA tail in 3' terminal is variable size FT (16-26 bases)" FT /note="acronym:RnW8V-M" FT /db_xref="taxon:235994" FT CDS 80..2140 FT /codon_start=1 FT /transl_table=1 FT /gene="RnPV1-W8 CP" FT /product="putative coat protein" FT /db_xref="GOA:Q50LH6" FT /db_xref="UniProtKB/TrEMBL:Q50LH6" FT /protein_id="BAD98238.1" FT /translation="MSSSRYNAAARAATIAQKSSSEAPKESKVPDNSVDFLTSYKAASS FT ARLSTANLFTVDVLPDFTPILMFIMFHAIQLSSDIDNRKHPKITTPTFVVYCLSLVYGY FT FLLSDMYVRPSASAPAQDYFDQPYKKQFSDMLLGLYVPKFLEPIIKNFTATMHEKMPNV FT VFCASAAGFNIKNHFGRFYPINAFANIHDSAARLDSRTKPNNASATILLQRIFTITDFH FT SAGNDNMHFGLHHLLGAFASTTRIDPANATNNRQFAHPLRQMFDSLFNPVLSRDYTRRS FT TLAPLNLESPVFKSYRLSFYDLVFGLTKYNAHELTIVLQSISSNLNGAIPLSGDLASMF FT KDASGDQILRHGYAVMEQPLHHCADNMPTDEFDVFESTVTVTTRHPEQAAADHKYLVLP FT NKPNTGTTHHLASAVCDTDPVHPVTVTQPSADFVLLRDVTRTFPIADQHLIPRDTEFLL FT YDEDRDFAPTVLVLDPTTNSTVSAYMATLTGMVIYSHEIDASAISFPNTEDINGLHNCQ FT FADSATPYTMVYRPSHYTLGTTAHIARKRIRVKDNRFKSALYLVDFAKIYIPRPILTTI FT DTLVSHGFPGFTFRDNVTFIGATTSALAQRVVSTRSNNDALPPHCNFGTISLWSPFSFT FT PKAHAFWNEKGIFGYYEEHVDAYFIANPRTLFGTTAALVEVKHYRASMPLP" XX SQ Sequence 2279 BP; 498 A; 825 C; 352 G; 604 T; 0 other; agaattcgtc ccaggccccc caaagtctac tcgaaagcta ccgctccaac cttctattct 60 ctttttgcaa gctcttacaa tgtcttcttc ccgctacaat gccgctgctc gtgctgccac 120 cattgctcag aaatcctctt ctgaagcacc caaggaatct aaagttcccg acaattctgt 180 cgacttcctg acctcctaca aggccgcctc ctccgcacgt ctctcgaccg ccaatctttt 240 tacggttgat gtacttcccg atttcactcc gatcctcatg tttatcatgt tccacgcgat 300 ccaactctcc tccgacatcg acaacagaaa acatcctaag ataacaacgc ccaccttcgt 360 cgtctactgc ctctcgctcg tctatggtta cttcctcctc tctgacatgt acgttcgccc 420 ttccgcctcc gctcctgccc aagactactt cgaccagccc tataaaaaac agttctctga 480 catgctcctt ggcctctacg ttcccaagtt cctcgagccc atcatcaaaa atttcactgc 540 aaccatgcat gaaaagatgc ccaacgtcgt cttctgcgcc tccgccgccg gttttaacat 600 caaaaatcat tttggtcgtt tctaccctat caacgcattc gcaaacattc acgactccgc 660 tgctcgcctc gactcccgaa ccaagcccaa caatgcctcc gccacgatac ttctccaacg 720 tatcttcaca atcacggact tccactctgc tggtaatgac aatatgcact tcggcctcca 780 ccatttactc ggtgccttcg cctctactac ccgtattgat cctgctaacg ctaccaacaa 840 ccgccaattt gcgcatcccc tccgccaaat gtttgattcc cttttcaacc ccgtcctctc 900 tcgtgattac acccgtcgtt ctacccttgc ccctctcaac ctcgaatccc ccgtattcaa 960 gtcctaccgc ctctcatttt atgatctcgt ttttggtctc actaaatata acgctcatga 1020 attaactatt gttctccaat ctatctcttc gaacctcaat ggtgccatcc ctctctctgg 1080 tgatctcgcc tcaatgttca aagatgcttc tggtgatcaa attcttcgcc acggctacgc 1140 tgtaatggaa caacctctcc accattgcgc cgacaacatg cccactgatg aatttgacgt 1200 cttcgaatcg actgtcactg tgactacccg ccaccctgaa caagccgccg ccgaccacaa 1260 gtatctcgtc ctcccgaaca agcccaacac cggtacgacc caccacctcg catccgcagt 1320 ctgtgacaca gaccccgttc atccggtcac tgtcactcag ccctccgccg acttcgtcct 1380 cctccgcgac gtaacccgga ccttcccaat cgccgatcaa catttgatcc ctcgtgatac 1440 agaattcctc ctgtatgatg aagatcgcga ctttgctccg accgttctcg tcctcgaccc 1500 cacaacgaac tcgaccgtct cagcctacat ggccacactc actggaatgg ttatttatag 1560 ccacgaaatt gacgcctccg ccatctcctt ccccaacact gaagacatca acggcctcca 1620 caactgccaa tttgccgact ccgccacccc ttacaccatg gtctatcgac ctagtcacta 1680 taccctcggt accactgccc acatcgcacg caaacgcatc cgcgtcaagg acaaccgctt 1740 caaaagcgcc ctgtacctcg ttgacttcgc caagatctac atcccccgcc ccatcttgac 1800 caccatcgat acccttgttt cccacggctt ccctggattc accttccgcg acaacgtcac 1860 gttcataggt gctactacct cagcacttgc ccaacgcgtc gtctcgacac gctcaaacaa 1920 tgatgcactt ccgcctcatt gcaacttcgg aaccatctca ctctggtctc ccttctcctt 1980 cacccctaaa gcacacgctt tctggaatga gaaaggaatc tttggttact acgaagagca 2040 cgtcgacgct tacttcattg cgaaccctcg caccctgttc ggcaccaccg ccgccctcgt 2100 tgaagtcaag cactaccgcg cttccatgcc ccttccttaa gccgcgtttt tctaatgatc 2160 atccgcccgc tcgtttttca ttcttaaatc ttccgcgcca gacactttcc ctctgaaatt 2220 ctttttgttt ttcgtttatg tgctagtcac atactttatt taacatttct tctcttatg 2279 //