ID AB110979; SV 1; linear; genomic RNA; STD; VRL; 2247 BP. XX AC AB110979; XX DT 23-JUL-2004 (Rel. 80, Created) DT 13-DEC-2008 (Rel. 98, Last updated, Version 2) XX DE Helicobasidium mompa partitivirus V1-1 RDRP gene for RNA-dependent RNA DE polymerase, complete cds. XX KW . XX OS Helicobasidium mompa partitivirus V1-1 OC Viruses; Riboviria; Partitiviridae; Alphapartitivirus. XX RN [1] RP 1-2247 RA Osaki H.; RT ; RL Submitted (29-MAY-2003) to the INSDC. RL Contact:Hideki Osaki National Institute of Fruit Tree Science, Laboratory RL of Plant Pathology; 2-1 Fujimoto, Tsukuba, Ibaraki 305-8605, Japan XX RN [2] RX PUBMED; 15323245. RA Osaki H., Nomura K., Matsumoto N., Ohtsu Y.; RT "Characterization of double-stranded RNA elements in the violet root rot RT fungus Helicobasidium mompa"; RL Mycol. Res. 108(Pt 6):635-640(2004). XX DR MD5; a8f4d59f6ee4784b865052fcc0ce949e. XX FH Key Location/Qualifiers FH FT source 1..2247 FT /organism="Helicobasidium mompa partitivirus V1-1" FT /host="Helicobasidium mompa" FT /mol_type="genomic RNA" FT /db_xref="taxon:233049" FT CDS 87..2207 FT /codon_start=1 FT /transl_table=1 FT /gene="RDRP" FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:Q6BE43" FT /db_xref="UniProtKB/TrEMBL:Q6BE43" FT /protein_id="BAD32677.1" FT /translation="MFNTVRNYLAEKTNNLLLQMQAFQRSQSHPDDPDLLVNDSDLRRH FT EQSFRDHPTELRRVKEYQQNYDQIVSSLDQKNALKDQHFEFFSPSDPTSFPADRLPAPG FT IQILPLRYHSTNPVIATNLVPETGFPLHPLIHYLVYRKYPRYIPYVEKYVRPLGTTDAT FT FSDFNREQVKIAPLDPERKRTVLTLCKHFLACVPYLPIHFVDFMYAKLPLHTGTGYFNR FT FSYDAQAHASFAHPEQYHDRHTSKGYYINTTMQYARTIVHRLKQFALPFNPKDFDSSSI FT FSRMRFFFLTRPTMLFTRNHISDRDGNLKQRPVYAVDDLFLILEVMLTFPLLVMARLPE FT CCIMYGLETIRGSNHWIDSTAKRFRSYFTIDWSQYDQRLPRCITDLYYTDFLESLIIIN FT FGYQPTADYADYPDLTPDMMFTRMTNLLHFLHTWYNNMVYVTADGFAYIRKFCGVPSGL FT FNTQYLDSFGNLYLIIDGMLEFGISIDEITSVLLLIMGDDNSGFTHWELLRLTHFLDFF FT ENYALVRYNMVLSKSKSVITRFRNRIETLSYSANFGMPTRPLGKLVAQLCYPEHGVIDK FT YMSSRAIGIAYAAAGMDPSFHRFCEDVYLTFLPYAAPIDSSSLERIIKHLPGQFKMLDA FT YTDHVNLESFPSIHEVRLKYSKWQGPLDLDSKWNPAHFTSPPNLPPQGFFTIEDWRTLH FT NIPRPPVTDYFP" XX SQ Sequence 2247 BP; 556 A; 707 C; 330 G; 654 T; 0 other; agaaaaggac tacagagccc tccgcttcta tccacgtccc cctaagattt tcttaccgca 60 aatttctact cttcctccct atcacgatgt tcaacacagt ccgcaactac cttgctgaga 120 agacaaacaa tcttctgctc caaatgcaag ctttccagcg ctctcaatca catccagatg 180 atcctgacct actcgtcaac gattctgacc tcagacgtca tgaacaatcc ttccgcgacc 240 atccaactga actacgcaga gtcaaagaat accaacaaaa ttacgatcaa atcgtatctt 300 cgctcgacca aaagaacgct ctaaaagacc aacactttga gtttttctca ccttccgatc 360 cgacttcctt ccccgccgat cgccttcctg cacctggaat tcaaatcctc cccctccgct 420 atcattccac taatcctgta atcgctacca acctcgttcc tgaaactggc ttccctctcc 480 atccgctgat tcactatctc gtatatcgta agtaccctag gtacattcct tatgtcgaaa 540 aatatgtccg cccccttggt acaacagacg ccaccttttc tgatttcaac cgtgaacaag 600 taaagatcgc tcctctcgat cctgagcgca aacgcactgt actcactcta tgcaagcact 660 ttctcgcatg tgtcccctat cttccaattc attttgttga ctttatgtac gcaaaactcc 720 cactccacac tggaaccgga tacttcaatc gcttttcata tgacgcacaa gctcacgctt 780 ctttcgcaca tcctgaacaa taccatgatc gccatacatc taaaggctat tatattaaca 840 cgactatgca atacgctcga actatcgttc accgcctaaa gcaattcgct cttcccttta 900 atcctaaaga tttcgactct tcgtccatct tctcacgtat gcgcttcttt ttcctcactc 960 gtcccactat gctattcact cgcaaccata tttctgaccg agacggtaat ctaaaacaac 1020 gccctgttta cgccgtcgat gaccttttcc tcatcctcga agttatgctt accttccctc 1080 ttctcgtaat ggctcgcctc cctgaatgct gcatcatgta cggcctcgag actattcgtg 1140 gctccaacca ctggattgat tcaaccgcaa aacggttccg atcctatttt acaatcgact 1200 ggtcccaata tgatcaacgt ttaccccgct gtatcactga cctctattac accgatttcc 1260 tcgaatctct cattattatc aactttggct accaaccaac tgctgactat gccgactatc 1320 ccgacctcac tcccgatatg atgttcacac gtatgactaa tctcctccac tttctccaca 1380 catggtacaa caatatggtt tacgtcactg ctgacggatt cgcctacatt cgcaaattct 1440 gcggtgtccc ctctggctta ttcaacacgc aatacctcga ctcatttggc aacctctatc 1500 tcattattga tggtatgctc gaatttggta tttcaatcga cgaaatcaca tctgtcctcc 1560 tactaattat gggtgatgat aactccggct ttacgcactg ggaacttctt cgtctcacgc 1620 acttcttaga tttctttgaa aactatgcac tcgtccgcta caatatggtt ctctctaagt 1680 ccaaatctgt tattactcgc ttccgtaatc gtatcgaaac actctcttac tccgctaatt 1740 ttggaatgcc cacacgtcca ctcggcaaac ttgtcgccca gctctgctac ccagaacatg 1800 gtgtcataga taagtacatg tcgtcacgcg ctattggcat tgcctacgct gccgctggca 1860 tggacccctc cttccatcgc ttttgtgaag acgtttatct aacgttcctt ccctacgctg 1920 cccctattga ttcatcttct ttagaacgta ttattaagca cttacctggt caattcaaaa 1980 tgctcgacgc atatactgac cacgttaatt tagagtcttt cccttcaatt catgaagtac 2040 gcctcaagta ctccaaatgg caaggtcctc tcgacctcga ctccaaatgg aatcctgcgc 2100 actttacgtc tccacccaac cttccacccc aaggtttctt cactatcgaa gactggcgca 2160 cccttcacaa catcccaagg ccacccgtca ccgactactt tccgtgaagt tactttacaa 2220 cagtccaagt atttactgct tatgctt 2247 //