ID AB109100; SV 1; linear; genomic RNA; STD; VRL; 2979 BP. XX AC AB109100; XX DT 23-OCT-2003 (Rel. 77, Created) DT 23-OCT-2003 (Rel. 77, Last updated, Version 1) XX DE Impatiens necrotic spot virus segment S genomic RNA, complete sequence. XX KW . XX OS Impatiens necrotic spot virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-2979 RA Nagano H., Tsuda S.; RT ; RL Submitted (22-APR-2003) to the INSDC. RL Shinya Tsuda, Department of Plant Pathology, National Agricultural Research RL Center, Laboratory of Virus Desease; Kan-nondai 3-1-1, Tsukuba, Ibaraki RL 300-8666, Japan (E-mail:shinyat@affrc.go.jp, Tel:81-29-838-8928, RL Fax:81-29-838-8929) XX RN [2] RA Nagano H., Tsuda S.; RT "Complete nucreotide sequence of S-RNA of Impatiens necrotic spot virus RT isolated in Japan"; RL Unpublished. XX DR MD5; 931b569c29f586f13d4cc4f3da2e46e9. DR EuropePMC; PMC5234141; 28081705. XX FH Key Location/Qualifiers FH FT source 1..2979 FT /organism="Impatiens necrotic spot virus" FT /segment="S" FT /strain="J" FT /mol_type="genomic RNA" FT /country="Japan" FT /isolation_source="verbena" FT /db_xref="taxon:11612" FT CDS 92..1429 FT /codon_start=1 FT /transl_table=1 FT /gene="NSs" FT /product="nonstructural protein" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:Q76D18" FT /protein_id="BAC99990.1" FT /translation="MYETIIKSKSSIWGTTSSGKAVVDSYWIHDQSSGKKLVEAQLYSD FT SRSKTSFCYTGKVGFLPTEEKEIISENVFVPIFDDIDLNFSFSGDVVEILVRSNTTNTN FT GVKHQGHLKVLSSQLLRMFEEQIAVPEITSRFGLKESDIFPPNNFIEAANKGSLSCVKE FT VLFDVKYSNNQSMGKVSVLSPTRSVHEWLYTLKPVFNQSQTNNRTVNTLAVKSLAMSAT FT SDLMSDTHSFVRLNNNKPFKISLWMRIPKIMKSNTYSRFFTLSDESSPKEYYISIQCLP FT NHNNVETALNITLISKLLLESTPSSSDHKIEMNFSDLKEPYNVIHDMSYPQRIVHSLLE FT IHTELAQTICDSVQQDIIVFTINEPDLKPKKFELGKKTLNYSEDGYGRKYFLSQTLKSL FT PRNSQTMSYLDSIQMPDWKFDYAAGETKISPRSEDVLKAISKLDLN" FT CDS complement(2042..2830) FT /codon_start=1 FT /transl_table=1 FT /gene="N" FT /product="nucreocapsid protein" FT /db_xref="GOA:Q76D17" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:Q76D17" FT /protein_id="BAC99991.1" FT /translation="MNKAKITKENIVKLLTQSDSLEFEETQNEGSFNFTDFFTNNREKI FT QNMTTASCLSFLKNRQSIMRVIKSADFTFGSVTIKKTRNNSERVGVNDMTFRRLDAMVR FT VHLVGMIKDNGSALTEAINSLPSHPLIASYGLATTDLKSCVLGVLLGGSLPLIASVLNF FT EIASLVLAIYQDAKHVELGIDMSKFSTKEAVGKVCTVLKSKGYSMNSVEIGKAKQYADI FT LKACSPKAKGLAAMDHYKEGLTSIYSMFNATIDFGKNDSI" XX SQ Sequence 2979 BP; 983 A; 525 C; 445 G; 1026 T; 0 other; agagcaattg tgtccccgaa caaccaagct acaacagaac ttacaatatt gtcaattaca 60 ttactacttc cattttaaca tgtctagtgc aatgtatgaa acaattatca aatcgaagtc 120 ctcaatctgg ggaacaacat cttcgggtaa agcagtagta gatagttatt ggattcatga 180 tcaatcttcc ggaaagaagt tggtcgaagc tcaactctat tctgactcca ggagcaagac 240 cagtttctgt tacactggta aagttggctt tctcccaaca gaagaaaaag aaattataag 300 tgagaatgtt tttgtgccta tttttgatga cattgatctg aatttctcct tttcaggaga 360 tgttgtcgaa attctggtca gatctaacac aacaaacaca aacggtgtta aacatcaagg 420 tcatctcaaa gtgttatcct ctcagttgct cagaatgttt gaagagcaaa tagcagtgcc 480 tgaaattact tcaagattcg gtctgaaaga atctgacatc ttccctccaa ataatttcat 540 tgaagctgca aataaaggat cattgtcttg tgtcaaagaa gttctttttg atgtcaagta 600 ttcaaacaac caatccatgg gcaaagtcag tgttctttct cctaccagaa gtgttcatga 660 atggctgtac acacttaagc ctgtttttaa ccaatcccag accaacaaca ggacagtaaa 720 cactttggct gtaaaatcac tggcaatgtc tgcaacttct gatttaatgt cagatactca 780 ttcatttgtc aggctcaata ataacaagcc ctttaaaatc agcctttgga tgcgcatccc 840 taaaataatg aaatcaaaca catacagccg cttcttcacc ctgtctgatg aatcttctcc 900 taaagagtat tatataagca ttcaatgtct cccaaatcat aacaatgttg aaacagcatt 960 gaatataact ttgatcagca aacttcttct tgaatcaact ccttctagca gtgatcataa 1020 aattgagatg aatttttctg acctaaaaga accttacaat gttatccatg atatgtcata 1080 tcctcaaaga attgtccatt cacttcttga aatccacaca gaacttgctc aaactatctg 1140 tgacagtgtt cagcaagaca taattgtctt cactataaat gagccagatc taaagccaaa 1200 aaagtttgag ctagggaaaa agactttaaa ttattcagaa gatggttatg ggagaaaata 1260 tttcctttct caaaccttga aaagtcttcc gagaaactca caaacaatgt cttatttgga 1320 tagcatccag atgcccgatt ggaaatttga ctatgctgca ggtgaaacaa aaatttctcc 1380 tagatcagag gatgttttga aagctatttc taaattagat ttaaattaaa cttggttaaa 1440 cttgttccta agtaaagttt gtttacatac atttagatca gatcaaacaa atctaataac 1500 agataaacca aaaacaatca tatgaaataa ataaataaac ataaaatata tataaaaaat 1560 acaaaaaaat cataaaataa taaaaaacca aaaaaagatg ccttcgggca caatttggtt 1620 gcttttaaat aaatgtttta aaatgaatgt attagtaaat tataaacttt aaatccaatc 1680 tactcacaaa tttggccaaa aatttgtttt tgttttttgt ttttgttttt gttttttgtt 1740 tttgttttgt tttatctgtt tttatttgtt tttgtttttt tgtttttatt tttatttata 1800 tatatatata tatatatttt tagttgtttt tattgttttt attatttttt tgtagctttt 1860 tattgtttat ttcacacgca aacccttttt agtctatata ttaaaacaca cattaaactt 1920 atttcaaata atttataaag cacacttaat acactcaaac aataattaat tatttttatt 1980 tttattttat ttatttaaat gcatttaaca caacacaaag caaaccaagc ttaaatctct 2040 tttaaataga gtcatttttc ccaaaatcaa tagtagcatt aaacatgctg taaatggagg 2100 taagcccttc tttgtagtgg tccattgcag caagtccttt agcttttgga ctacaagcct 2160 ttagtatatc tgcatattgt tttgccttac caatttcaac agagttcatg ctatatcctt 2220 tgctttttag aactgtgcac actttcccaa ctgcctcttt agtgctaaac ttagacatgt 2280 caattccaag ctcaacatgt ttagcatctt gataaatagc cagaactagt gaagctattt 2340 caaaattcag tacagatgct atcagaggaa gacttcctcc taagagaaca cccaagacac 2400 aagatttcaa atctgtggtt gcaagaccat atgaggcaat cagagggtga cttggaaggc 2460 tgtttatagc ttcagtcaga gcagatccat tgtcctttat cattccaaca agatgaactc 2520 taaccattgc atcaagtctt cggaaagtca tatcattgac tccaactctt tctgaattgt 2580 ttctagtttt cttaattgtg actgatccaa aagtgaagtc agcactctta atgactctca 2640 ttatagattg cctattcttg aggaaggata ggcaagatgc agtagtcatg ttctgaattt 2700 tttcacggtt gttggtaaag aagtcagtga aattgaaaga tccttcattt tgagtttcct 2760 caaattctaa ggaatcagat tgagtcaaaa gcttgactat gttctccttg gtaatctttg 2820 ctttgttcat cttgatctgc tgactttact aactttaaaa cttaaagtgt tcaaattact 2880 aaatagtact tgcggttaaa gtagtatttg gtaaaatttg taatttttca gtttctagct 2940 ttggattata tgatgttata ttcgtgacac aattgctct 2979 //