ID   AB098560; SV 1; linear; genomic RNA; STD; VRL; 1710 BP.
XX
AC   AB098560;
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DT   24-JUN-2003 (Rel. 76, Created)
DT   30-JAN-2009 (Rel. 99, Last updated, Version 3)
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DE   Pepper mottle virus NIb, cp genes for polyprotein, partial cds.
XX
KW   .
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OS   Pepper mottle virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
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RN   [1]
RP   1-1710
RA   Ogawa Y., Hagiwara K., Iwai H.;
RT   ;
RL   Submitted (23-DEC-2002) to the INSDC.
RL   Contact:Hisashi Iwai Kagoshima university, Faculty of agriculture; 1-21-24,
RL   Korimoto, Kagoshima, Kagoshima 890-0065, Japan
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RN   [2]
RA   Ogawa Y., Hagiwara K., Iwai H., Izumi S., Arai K.;
RT   "New record of Pepper mottle virus isolated from Capsicum annuum in Japan";
RL   Unpublished.
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DR   MD5; b62d80f81485b2034188aaecef97991b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1710
FT                   /organism="Pepper mottle virus"
FT                   /isolate="JKK"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Kagoshima prefecture, Kaseda city"
FT                   /isolation_source="green pepper"
FT                   /note="isolated from green pepper in Kaseda city,
FT                   Kagoshima."
FT                   /db_xref="taxon:12209"
FT   CDS             <1..1444
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q7TDX2"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q7TDX2"
FT                   /protein_id="BAC78390.1"
FT                   /translation="PSTVVDNSLMVVLAMHYAFVREGVVFEEIDSICKFFVNGDDLLIA
FT                   VNPERENLLDTLSSHFSDLGLNYDFSSRTRDKSELWFMSHCGISVEGMYIPKLEEERIV
FT                   SILQWDRAELPEYRLEAICAAMIESWGYPQLTHEIRRFYSWLIEKNPYADLASEGKAPY
FT                   ISELALKKLYLNQDVQNDELQVYLRYFAEADEEFECGTYEVHHQSSSRSDTLDAGEEKK
FT                   KNKEVATVSDGMKKKEVESTRDSDVNAGTVGTFTVPRIKSITEKMRMPKQKKKGVLNLA
FT                   HLLEYKPSQVDISNTRSTQAQFDNWYSEVMKAYDLQEEAMGTVMNGLMVWCIENGTSPN
FT                   ISGTWTMMDGDEQVEFPLKPVIENAKPTFRQIMAHFSDVAEAYIEMRNKQEPYMPRYGL
FT                   VRNLRDMGLARYAFDFYEVTSRTSTRAREAHIQMKAAALKSAQTRLFGLDGGIGTQGEN
FT                   TERHTTEDVSPDMHTLLGVRNM"
FT   mat_peptide     <1..622
FT                   /gene="NIb"
FT                   /product="polymerase"
FT   mat_peptide     623..1441
FT                   /gene="CP"
FT                   /product="coat protein mature peptide"
FT   polyA_site      1710
XX
SQ   Sequence 1710 BP; 542 A; 301 C; 406 G; 461 T; 0 other;
     accttccacc gttgtagaca actcacttat ggttgtactt gctatgcatt atgcatttgt        60
     acgggaaggt gtggtatttg aagaaattga ctccatatgc aagttcttcg ttaatggaga       120
     tgatttgcta atagccgtga acccagaacg tgaaaactta ttggacacac tgtcaagtca       180
     tttttctgat ttagggctca attatgattt ctcatctcgg acgagggata aatcagaatt       240
     gtggttcatg tcacattgtg ggatttctgt tgaaggtatg tatataccta agcttgaaga       300
     ggagcgaatt gtatcaattc tccaatggga ccgagcggag ctaccagagt acagattgga       360
     ggctatttgt gcagcaatga ttgaatcatg gggataccca caattaactc atgagattcg       420
     aagattctat agctggttaa ttgagaagaa cccatacgct gacttggcat ctgaaggaaa       480
     agctccatat atttctgaac tagctctaaa gaagctatat ctgaatcagg atgtacaaaa       540
     tgatgaactt caggtctacc tcagatattt cgctgaagcg gatgaagagt ttgaatgtgg       600
     tacatatgaa gttcatcatc agagcagctc aagatcagat acattggatg ctggagagga       660
     gaaaaagaaa aataaagaag tagccactgt gtccgatgga atgaaaaaga aggaggttga       720
     atcaacacgc gattctgatg tgaatgcggg aactgttgga acattcaccg ttccaagaat       780
     caaatcaatc actgagaaga tgcgtatgcc aaaacaaaag aaaaagggtg ttctcaactt       840
     ggctcattta cttgaataca aaccaagcca agtcgacata tcgaatactc gttcaaccca       900
     ggcacaattt gacaattggt atagtgaagt tatgaaagca tacgatctac aagaggaggc       960
     aatgggtaca gtgatgaatg gcttaatggt ttggtgcatt gaaaatggca cgtccccaaa      1020
     cattagtgga acatggacca tgatggatgg agacgaacag gtggaattcc cattaaagcc      1080
     cgtgatagag aatgctaagc cgacttttcg gcagataatg gcgcattttt ctgatgtggc      1140
     tgaggcatat atagaaatgc gcaataagca agaaccatac atgccacgat atggtttggt      1200
     tcgaaattta cgagacatgg gtctggctcg atacgcattt gacttctatg aagtcacatc      1260
     gcgtacgtca acacgtgctc gcgaagccca tatccaaatg aaagcagcag cattgaaatc      1320
     tgctcaaaca aggctatttg gattggatgg tggcatagga acacaaggag aaaacacaga      1380
     gcgccacacc actgaagatg tgagccccga catgcatacc ctgcttgggg tcaggaatat      1440
     gtgactgatg tggtctctgg gatgaaatat tattatatgt agtatgcaat atatagtatg      1500
     gcttttctcg ttccagtctt tatattaatg agagtaactt aagtaagtaa tttgtacttc      1560
     aaggattaat caaggtgact ctctgacact ctcagtgagg tgacttgttt agtctgagtt      1620
     tacttattgt gagtataaag aatctctcag aaaacgagag tgatttctag acacactcta      1680
     ggaggtgatc gtagttggca tgagagagac                                       1710
//