ID AB098081; SV 1; linear; genomic RNA; STD; VRL; 3631 BP. XX AC AB098081; XX DT 21-DEC-2002 (Rel. 74, Created) DT 27-JAN-2009 (Rel. 99, Last updated, Version 4) XX DE Zucchini yellow mosaic virus gene for polyprotein (P1 protease, HC-Pro, P3 DE protease region), partial cds. XX KW . XX OS Zucchini yellow mosaic virus OC Viruses; Riboviria; Potyviridae; Potyvirus. XX RN [1] RP 1-3631 RA Choi S.K., Yoon J.Y., Ryu K.H., Choi J.K., Park W.M.; RT ; RL Submitted (16-DEC-2002) to the INSDC. RL Contact:S K Choi Korea University, Graduate School of Biotechnology; 5 Ga RL 1, Anamdong Sungbukku, Seoul 136-701, South Korea XX RN [2] RA Choi S.K., Yoon J.Y., Ryu K.H., Choi J.K., Park M.M.; RT "The complete sequence analyis of a korean strain of Zucchini yellow mosaic RT virus (ZYMV-A) isolated from Althaea rosea"; RL Unpublished. XX DR MD5; 9233c41338b8679191be28c3b85a3761. XX FH Key Location/Qualifiers FH FT source 1..3631 FT /organism="Zucchini yellow mosaic virus" FT /host="Althaea rosea" FT /lab_host="Cucurbita pepo" FT /strain="A" FT /mol_type="genomic RNA" FT /country="South Korea:Seoul" FT /db_xref="taxon:12232" FT 5'UTR 1..139 FT /experiment="experimental evidence, no additional details FT recorded" FT CDS 140..>3631 FT /codon_start=1 FT /transl_table=1 FT /product="polyprotein" FT /db_xref="GOA:Q8B6A8" FT /db_xref="InterPro:IPR001456" FT /db_xref="InterPro:IPR002540" FT /db_xref="InterPro:IPR031159" FT /db_xref="InterPro:IPR039560" FT /db_xref="InterPro:IPR042308" FT /db_xref="UniProtKB/TrEMBL:Q8B6A8" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="BAC45011.1" FT /translation="MASIMIGSISVPIAKTEQCANTQVSNRANIVAPGHMATCPLPLKT FT HMYYRHESKKLMQSNKSIDILNNFFSTDEMKFRLTRNEMSKLKKGPSGRIVLRKPSKQR FT VFARIEQDEAARKEEAVFLEGNYDDSITNLARVLPPAVTHNVDVSLRSPFYKRTYKKER FT KKVAQKQIVQAPLNSLCTRVLKIARNKNIPVEMIGNKKTRHTLTFKRFRGCFVGKVSVA FT HEEGRMRHTEMSYEQFKWLLKAICQVTHTERIREEDIKPGCSGWVLGTNHTLTKRYSRL FT PHLVIRGRDDDGIVNALEQVLFYSEVDHSSSQPEVQFFQGWRRIFDKFRPSPDHVCKAD FT HNNEECGELAAIFCQALFPVVKLSCQTCRESLVEVSFEEFKDSLNANFIIHKDEWGSFK FT EGSQYDNIFKLIKVATQATQNLKLSSEVMKLVQNHTSTHMKQIQDINKALMKGSLVAQD FT ELDLALKQLLEMTQWFKNHMHLTGEEALKMFRNKRSSKAMINPSLLCGNQLDKNGNFVW FT GERGYHSKRLFKNFFEEVIPSEGYTKYVVRNFPNGTRKLAIGSLIVPLNLDRARTALLG FT ESIEKKPLTSACVSQQNGNYIHSCCCVTMDDGTPMYSELKSPTKRHLVIGASSDPKYID FT LPASEAERMYIAKEGYCYLSIFLAMLVNVNENEAKDFTKMIRDVLIPMLGQWPSLMDVA FT TAAYILGVFHPETRCAELPRILVDHATQTMHVIDSYGSLTVRYHVLKAGTVNHLIQFAS FT NDLQSEMKHYRVGGTPTQRIKLEEQLIKGIFKPKLMMQLLHDDPYILLLGMISPTILVH FT MYRMRHFERGIEIWIKRDHEIGKIFVILEQLTRKVALAEVLVDQLDLISEASPHLLEIM FT KGYQDNQRAYVPALDLLTIQVEREFSNKELKTNGYPDLQQTLFDMREKIYAKQLHNSWQ FT ELSLLEKSCVTVRLKRFSIFTERNLIQRAKEGKRTSSLQFVHECFITTRVHAKSIRDAS FT VRKLNEALVGTCKFFLSCGFKIFARCYSDIIYLVNVCLVFSLVLQMSNTVRNMIAATRE FT EKERAMANKADENERTLMHMYHIFCKKQDDAPIYNDFLEHVRNVRPDLEETLLYMAGAE FT VVATQAKSAVQVRFEKIIAVLALLTMCFDAERSDAIFKILTKLKTVFGTVGETVRLQ" FT mat_peptide 140..1051 FT /product="P1 protease" FT mat_peptide 1052..2437 FT /product="helper component protease" FT /note="HC-Pro" FT mat_peptide 2438..>3631 FT /product="P3 protease" XX SQ Sequence 3631 BP; 1152 A; 704 C; 831 G; 944 T; 0 other; aaaattgaaa caaatcacaa agactacaag aatcaacgat caagcaaacg aatttttgaa 60 cgtatttaca aacaagcaat ctaaaactct tacagtatta agaaattctc caatcacttc 120 gtttacttca gacataacaa tggcctccat catgattggt tcaatctctg tacccattgc 180 aaagactgag cagtgtgcaa acactcaagt aagtaatcgg gctaatatag tggcacctgg 240 ccacatggca acatgcccat tgccactgaa aacgcacatg tattacaggc atgagtccaa 300 gaagttgatg caatcaaaca agagcattga cattctgaac aacttcttca gcactgacga 360 gatgaagttt aggctcactc gaaacgagat gagcaagctg aaaaagggtc cgagcgggag 420 gatagtcctc cgcaagccga gtaagcagcg ggttttcgct cgtatcgagc aggatgaggc 480 agcacgcaag gaagaggctg ttttcctcga aggaaattat gacgattcca tcacaaatct 540 agcacgtgtt cttccacctg ccgtgactca caacgttgat gtgagcttgc gatcaccgtt 600 ttacaagcgc acatacaaga aggaaaggaa gaaagtggcg caaaagcaaa ttgtgcaagc 660 accacttaat agcttgtgca cacgtgttct taaaattgca cgcaataaaa atatccctgt 720 tgagatgatt ggcaacaaga agacgagaca tacactcacc ttcaagaggt ttaggggatg 780 ttttgttgga aaggtgtcag ttgcgcatga agaaggacga atgcggcaca ctgagatgtc 840 gtatgagcag tttaaatggc ttcttaaagc catttgtcag gtcacccata cagagcgaat 900 tcgtgaggaa gatattaaac caggttgtag tgggtgggtg ttgggcacta atcatacatt 960 gactaaaaga tattcaagat tgccacattt ggtgattcga ggtagagacg acgatgggat 1020 tgtgaacgcg ctggaacagg tgttatttta tagcgaagtt gaccactctt cgtcgcaacc 1080 ggaagttcag ttcttccaag gatggcgacg aatatttgat aagtttaggc ctagcccaga 1140 tcatgtgtgc aaagctgacc acaacaacga ggaatgtggt gagttagcag caatcttttg 1200 tcaggctcta ttcccagtag tgaaactatc gtgccaaaca tgcagagaaa gcttagtaga 1260 agttagcttt gaggaattca aagattcttt gaacgcaaac tttattatcc acaaggatga 1320 atggggtagt ttcaaggaag gctctcaata cgataatatt ttcaaattaa tcaaagtggc 1380 aacacaggca actcagaatc tcaagctctc atctgaagtt atgaaattag ttcagaacca 1440 cacaagcact cacatgaagc aaatacaaga catcaataag gcgctcatga aaggttcatt 1500 ggttgcgcaa gacgaattgg acttagcttt gaaacagctt cttgaaatga ctcagtggtt 1560 taagaaccac atgcacctga ctggtgagga ggcattgaag atgttcagaa ataagcgttc 1620 tagcaaggcc atgataaatc ctagccttct atgtggcaac caattggaca aaaatggaaa 1680 ttttgtttgg ggagaaagag gataccattc caagcgatta ttcaagaact tcttcgaaga 1740 agtaatacca agcgaaggat atacgaagta cgtagtgcga aactttccaa atggtactcg 1800 taagttggcc ataggctcat tgattgtacc acttaatttg gatagggcac gcactgcact 1860 acttggagag agtattgaga agaagccact cacatcagcg tgtgtctccc aacagaatgg 1920 aaattatata cactcatgct gctgtgtaac gatggatgat ggaaccccga tgtactccga 1980 gcttaagagc ccgacgaaga ggcatctagt tataggagct tctagtgatc caaagtacat 2040 tgatctgcca gcatctgagg cagaacgcat gtatatagca aaggaaggtt attgctatct 2100 cagtattttc ctcgcaatgc ttgtaaatgt taatgagaac gaagcaaagg atttcaccaa 2160 aatgattcgt gatgttttga tccccatgct tgggcagtgg ccttcattga tggatgttgc 2220 aactgcagca tatattctag gtgtatttca tcctgaaacg cgatgtgctg aattacctag 2280 gattcttgtt gatcacgcta cgcaaaccat gcatgtcatt gattcatatg gatcattaac 2340 tgttaggtat cacgtgctca aggccggaac tgtcaatcat ctaattcaat ttgcctcaaa 2400 tgatctgcaa agcgagatga agcattacag agttggcgga acgccaacac agcgcatcaa 2460 acttgaggag caactgatta aaggaatctt caaaccaaaa cttatgatgc agctcctgca 2520 tgatgaccca tacatattat tgcttggcat gatctcacca accattcttg tacacatgta 2580 taggatgcgc cattttgaga ggggtatcga gatatggatt aagagagatc atgaaattgg 2640 aaagattttc gttatattag aacagctcac acggaaggtt gctctggctg aagttcttgt 2700 ggatcaactc gatttgataa gcgaagcttc accacattta cttgaaatca tgaagggtta 2760 tcaagataac caaagggcgt atgtacctgc actggatctg ctaacaatac aagtagagcg 2820 tgagttttca aataaggaac tcaaaactaa tggatatcca gatttgcaac aaacgttgtt 2880 tgatatgaga gaaaaaattt atgcaaagca actgcacaat tcatggcaag agctaagctt 2940 gctggaaaaa tcttgtgtaa ccgtgcgatt gaagcgattc tcgattttta cggaaagaaa 3000 tttaatccag cgagcaaaag aaggaaagcg cacatcttcg ctacaatttg ttcacgagtg 3060 ctttatcacg acccgagtac atgcgaagag cattcgcgat gcaagcgtgc gcaagctaaa 3120 tgaggctctc gttggaacct gtaaattctt tctctcttgt ggttttaaaa tttttgcgcg 3180 gtgttacagc gacataatat accttgtgaa cgtgtgtttg gtattctcct tggtattaca 3240 aatgtctaat actgtgcgta acatgatagc ggcgacaagg gaagagaagg agagagcgat 3300 ggcaaacaaa gctgatgaaa atgaaagaac attaatgcac atgtatcaca ttttttgtaa 3360 gaagcaggat gatgcgccca tatataatga ttttcttgaa catgttcgca atgttagacc 3420 agatcttgag gaaaccctct tgtacatggc tggtgcagaa gttgttgcaa cacaggccaa 3480 atcagcggtt caggttcggt tcgagaagat tatagctgtg ttggcgctgc tcactatgtg 3540 ctttgacgcc gaaagaagtg acgccatttt taagattttg acaaagctca aaacagtttt 3600 tggcacggtt ggagaaacgg ttcgacttca g 3631 //