ID   AB092815; SV 1; linear; genomic RNA; STD; VRL; 1054 BP.
XX
AC   AB092815;
XX
DT   02-APR-2003 (Rel. 75, Created)
DT   13-DEC-2008 (Rel. 98, Last updated, Version 3)
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DE   Papaya leaf distortion mosaic virus gene for polyprotein precursor (NIb
DE   replicase and coat protein), partial cds, isolate: J179P.
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KW   .
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OS   Papaya leaf distortion mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
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RN   [1]
RP   1-1054
RA   Maoka T.;
RT   ;
RL   Submitted (03-OCT-2002) to the INSDC.
RL   Contact:Tetsuo Maoka National Agricultural Research Center for Hokkaido
RL   Region, Plant Virology Lab.; Hitsujigaoka 1, Toyohira, Sapporo 0628555,
RL   Japan URL    :http://cryo.naro.affrc.go.jp/
XX
RN   [2]
RX   DOI; 10.1094/PHYTO-95-0128.
RX   PUBMED; 18943981.
RA   Maoka T., Hataya T.;
RT   "The Complete Nucleotide Sequence and Biotype Variability of Papaya leaf
RT   distortion mosaic virus";
RL   Phytopathology 95(2):128-135(2005).
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DR   MD5; d1986780bcd2a92788f5e547c31886f2.
DR   EuropePMC; PMC4213569; 25337891.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1054
FT                   /organism="Papaya leaf distortion mosaic virus"
FT                   /host="Carica papaya"
FT                   /strain="P"
FT                   /isolate="J179P"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Okinawa"
FT                   /clone="14"
FT                   /note="The yellow mosaic (YM) isolate of PLDMV"
FT                   /note="synonym: Papaya leaf-distortion mosaic potyvirus"
FT                   /db_xref="taxon:46917"
FT   CDS             <1..1053
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein precursor"
FT                   /db_xref="GOA:Q80LX1"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q80LX1"
FT                   /protein_id="BAC67181.1"
FT                   /translation="YNHLASEGKAPYISETALKRLYTCEEGSADEIISYLEMCANDLNE
FT                   DEYFDDEDVSHQSALDAGKPTAENKKDDEEKKNKEERQENKNKNKEVEKKHEKTSSSAS
FT                   GAIVSNNEKDKDVDVGSSGSFIIPRIKSISNKLTMPKVKGKGILNLEFLLQYTPDQVDI
FT                   SNTRASISQFNTWYNAVKRSYGVSDEDMGIILNGLMVWCIENGTSPNINGMWFMMQGEE
FT                   QIEYPLQPVVENAKPTLRQIMAHFSNVAEAYIEKRNYEKPYMPRYGIQRNLTDMSLARY
FT                   AFDFYEMTSRTPARAREAHIQMKAAALRDANNKMFGLDGKVGNATENTERHTADDVNHN
FT                   THAFTGARYY"
FT   mat_peptide     <1..171
FT                   /gene="NIb"
FT                   /product="NIb replicase"
FT   mat_peptide     172..1050
FT                   /gene="CP"
FT                   /product="coat protein"
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SQ   Sequence 1054 BP; 381 A; 187 C; 238 G; 248 T; 0 other;
     tacaatcatc tcgcatctga ggggaaggca ccatacattt cagaaacagc gctcaaaaga        60
     ctttacacat gtgaggaagg aagcgctgat gaaatcatat catacttaga gatgtgtgcg       120
     aatgatttga acgaggatga atacttcgat gatgaagatg tttctcacca gtccgctctt       180
     gatgctggca aacccacagc agaaaacaag aaagacgatg aagagaagaa gaataaagaa       240
     gaaaggcaag aaaataaaaa taaaaataaa gaagttgaga agaaacatga gaaaacttcg       300
     agtagcgcat ctggtgctat tgtttcaaat aatgaaaaag acaaggatgt cgatgtagga       360
     tcaagcggat ctttcattat accacgaatt aaatcgatat ccaataaact cacaatgcca       420
     aaagtaaaag ggaaaggaat tttaaatttg gagttccttt tacagtacac accagatcaa       480
     gtagacattt caaacactag ggcaagtatt tcacagttca acacatggta taatgctgtg       540
     aagaggtcct atggtgtatc tgatgaagat atgggaataa ttttgaatgg attaatggtt       600
     tggtgtattg aaaatggaac atctccaaat attaatggca tgtggtttat gatgcaaggg       660
     gaagaacaaa ttgaataccc ccttcaacca gtagtagaaa acgcaaaacc cactttgcgt       720
     cagattatgg ctcactttag caatgttgct gaagcataca tcgagaagag aaattatgag       780
     aagccatata tgccgaggta cggtattcaa cggaacctca ccgacatgag tttggcgcga       840
     tatgcttttg atttctatga aatgacatca aggacgccag ctcgggcccg ggaagcccac       900
     atccagatga aagccgcagc cttgcgagat gcaaataata agatgtttgg actggatgga       960
     aaagtcggaa atgcgactga gaacacggag cgccacaccg cagatgatgt taaccataac      1020
     actcatgcat ttaccggcgc tcgatattat taga                                  1054
//