ID AB088385; SV 1; linear; genomic RNA; STD; VRL; 2999 BP. XX AC AB088385; XX DT 19-JUL-2002 (Rel. 72, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 6) XX DE Orthotospovirus tomatomaculae NSs and N genes for nonstructural protein and DE nucleoprotein, complete cds. XX KW . XX OS Orthotospovirus tomatomaculae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RX PUBMED; 12459466. RA Takeda A., Sugiyama K., Nagano H., Mori M., Kaido M., Mise K., Tsuda S., RA Okuno T.; RT "Identification of a novel RNA silencing suppressor, NSs protein of Tomato RT spotted wilt virus"; RL FEBS Lett 532(1-2):75-79(2002). XX RN [2] RP 1-2999 RA Tsuda S., Nagano H.; RT ; RL Submitted (17-JUL-2002) to the INSDC. RL Contact:Shinya Tsuda National Agricultural Research Center, Virus Desease RL Laboratory; Kan-nondai 3-1-1, Tsukuba, Ibaraki 305-8666, Japan XX DR MD5; d1590ddb07ae6b3e3d85ea4b46d117c2. DR EuropePMC; PMC2268452; 18216118. XX FH Key Location/Qualifiers FH FT source 1..2999 FT /organism="Orthotospovirus tomatomaculae" FT /segment="S" FT /isolate="ordinary strain" FT /mol_type="genomic RNA" FT /country="Japan" FT /db_xref="taxon:3052585" FT CDS 89..1492 FT /codon_start=1 FT /gene="NSs" FT /product="nonstructural protein" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:Q8JVL0" FT /protein_id="BAC05685.1" FT /translation="MSSSVYESIIQTKASVWGSTASGKAVVDSYWIHELGTGSPLVQTQ FT LYSDSRSKSSFGYTAKVGNLPCEEEEILSQHVYIPIFDDVDFSINIDDSVLALSVCSNT FT VNTNGVKHQGHLKVLSPAQLHSIGSTMNGSDITDRFQLQEKDIIPNDRYIEAVNKGSLS FT CVKEHTYKVEMCYNQALGKVNVLSPNRNVHEWLYSFKPNFNQVESNNRTVNSLAVKSLL FT MSAGNNIMPNSQAFVKASTDSHFKLSLWLRVPKVLKQISIQKLFKVAGDETNKTFYLSI FT ACIPNHNSVETALNISVICKHQLPIRKFKAPFELSMMFSDLKEPYNIVHDPSYPQRIVH FT ALLETHTSFAQVLCNNLQEDVIIYTLNNYELTPGKLDLGERTLNYSEDVCKRKYFLSKT FT LECLPSNTQTMSYLDSIQIPSWKIDFARGEIKISPQSVSVAKSLLKLDLSGIKKKESKI FT SEACASGSK" FT gene 89..1492 FT /gene="NSs" FT CDS complement(2071..2847) FT /codon_start=1 FT /gene="N" FT /product="nucleoprotein" FT /db_xref="GOA:Q8JVK9" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:Q8JVK9" FT /protein_id="BAC05686.1" FT /translation="MSKVKLTKENIVALLTQGKDLEFEEDQNLVAFNFKTFCLENLDQI FT KKMSIISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSNRIGATEMTFRRLDSLIRVRL FT VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS FT VVLAIYQDAKYKDLGIDPKKYDTKEALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS FT NPNAKGSIAMEHYSETLNKFYEMFGVKKQAKLAELA" FT gene complement(2071..2847) FT /gene="N" XX SQ Sequence 2999 BP; 948 A; 548 C; 469 G; 1034 T; 0 other; agagcaattg tgtcataatt ttattcataa tcaaacctca cttagaaaat cacaaaactg 60 taataagaac acagtaccaa taaccataat gtcttcaagt gtttatgagt cgatcattca 120 gacaaaagct tcagtctggg gatcaactgc atctggtaaa gctgttgtag attcttactg 180 gattcatgaa cttggtactg gttctccact agttcaaacc cagctgtatt ctgattcaag 240 aagcaaaagt agctttggct atactgcaaa ggtagggaat cttccctgtg aggaagaaga 300 aattctttct cagcatgtgt atatccctat ttttgatgat gttgatttta gcatcaatat 360 tgatgactct gttctggcac tgtctgtttg ctccaacaca gtcaatacta acggagtgaa 420 acatcaaggt catttgaaag ttttgtctcc tgctcagctc cactctattg gatctaccat 480 gaacggatct gatattacag accgattcca gctccaagaa aaagatataa ttcccaatga 540 caggtacatt gaagctgtaa acaaaggctc tttgtcttgt gttaaagagc atacctataa 600 ggtcgagatg tgctacaatc aagctttagg caaagtgaat gttctatccc ctaacagaaa 660 tgtccatgaa tggctgtaca gtttcaagcc aaatttcaat caagttgaaa gcaacaacag 720 aactgtaaat tctcttgcag tgaaatctct gctcatgtca gcaggaaata acatcatgcc 780 taactctcag gcttttgtca aagcttccac tgattctcat ttcaagctga gcctctggct 840 aagagttcca aaggttttga agcagatttc cattcagaaa ttgttcaaag ttgcaggaga 900 tgaaactaac aaaacatttt atttatctat tgcttgcatt ccaaaccata acagtgttga 960 gacagcttta aacatttctg ttatttgcaa gcatcagctc ccaatccgta aatttaaagc 1020 tccttttgaa ttatcaatga tgttttctga tttaaaggag ccttacaaca ttgttcatga 1080 tccttcatat cctcagagga ttgttcatgc tctgcttgaa actcacacgt cttttgcaca 1140 agttctttgc aacaacttgc aagaagacgt gatcatctac actttgaaca actatgagct 1200 aactcctgga aagttagatc taggtgaaag aaccttaaat tacagtgaag atgtctgcaa 1260 aaggaaatat ttcctctcaa aaacacttga atgtcttcca tctaacacac aaactatgtc 1320 ttacttagac agcatccaaa tcccttcctg gaagatagac tttgctaggg gagaaattaa 1380 aatttctcca caatctgttt cagttgcaaa atctttgtta aagcttgatt taagtgggat 1440 caaaaagaaa gaatctaaga tttcggaagc atgtgcttca ggatcaaaat aatcttgccg 1500 tgtccagctt ttctaattat gttatgttta ttttctttct ttacttataa ttatttctct 1560 gttttgtcat ttcctttgaa tttctcttgt ttaatagaaa ccataaaacg aaaataaaaa 1620 atgaagcaaa aatcaaaaaa tgaaacaaaa atcaaaaaat gaaataaaaa taacaaaaaa 1680 ataaaagact aaaaaccaaa aaaattaaaa aacaaaaaaa ccaaaaagat cccgaaaggg 1740 acaattttgg ccaaatttgg gttttgtttt tgttttttgt tttttgtttt ttatttttta 1800 tttttatttt ttatttttta ttttttattt ttatttttat tttatttatt tattttattt 1860 tatttttatt cttattttta tttttatttt tattttatgt tttttgttgt ttttgttatt 1920 ttgtttattt attaagcaca acacacagaa agcaaacttt aattaaacac acttatttta 1980 aatttagcac actaagcaag cataagcaat aaagataaag aaagctttat atatttataa 2040 gcttttttat aatttaactt acagctgctt ttaagcaagt tctgcaagtt ttgcctgttt 2100 tttaacccca aacatttcat agaacttgtt aagagtttca ctgtaatgtt ccatagcaat 2160 acttccttta gcattaggat tgctggagct aagtatagca gcatactctt ttcctttctt 2220 cacctgatct tcattcattt caaatgcttt gcttttcagc acagtgcaaa cttttcctaa 2280 ggcttcctta gtgtcatact tctttgggtc gatcccgagg tctttgtatt ttgcatcctg 2340 atatatagcc aagacaacac tgatcatctc aaagctatca actgaagcaa taagaggtaa 2400 gctacctccc agcattatgg caagcctcac agactttgca tcatcaagag gtaatccata 2460 ggcttgaatc aaagggtgag aagcaatctt agatttgata gtattgagat tctctgaatt 2520 cccagtttcc tcgacaagcc tgaccctgat caagctatca agccttctga aggtcatttc 2580 agtggctcca atcctgtttg aagttttctt tatggtaatt ttaccaaaag taaaatcact 2640 ttgcttaata accttcatta tactctgacg attctttagg aacgtcagac acgaaataat 2700 gctcatcttc ttgatctggt caaggttttc cagacaaaaa gtcttgaagt tgaatgctac 2760 cagattctga tcttcctcaa attcaaggtc tttgccttgt gtcaacaaag caacaatgtt 2820 ttccttagtg agcttaacct tagacatgat gatcacagaa gttattatat gctttgaccg 2880 tatgtaattc aaggtgcaaa agtacaactc tgtattccgc agtcgtttct tagggtttta 2940 atgtgatgat ttgtaagact gagtgctaag gtttgaataa aatttgacac aattgctct 2999 //