ID AB085814; SV 1; linear; genomic RNA; STD; VRL; 5207 BP. XX AC AB085814; XX DT 14-AUG-2003 (Rel. 76, Created) DT 05-OCT-2006 (Rel. 89, Last updated, Version 2) XX DE Helicobasidium mompa No.17 dsRNA virus large segment, complete sequence. XX KW . XX OS Helicobasidium mompa totivirus 1-17 OC Viruses; Riboviria; Totiviridae; Victorivirus. XX RN [1] RP 1-5207 RA Osaki H.; RT ; RL Submitted (26-MAY-2002) to the INSDC. RL Hideki Osaki, National Institute of Fruit Tree Science, Department of Plant RL Protection; 2-1 Fujimoto, Tsukuba, Ibaraki 305-8605, Japan RL (E-mail:hideki@affrc.go.jp, Tel:81-298-38-6546, Fax:81-298-38-6546) XX RN [2] RX DOI; 10.1023/A:1024453111809. RX PUBMED; 12876450. RA Nomura K., Osaki H., Iwanami T., Matsumoto N., Ohtsu Y.; RT "Cloning and characterization of a totivirus double-stranded RNA from the RT plant pathogenic fungus, Helicobasidium mompa Tanaka"; RL Virus Genes 26(3):219-226(2003). XX DR MD5; a95746b214d5ef778a9feed0eed6c40b. DR EuropePMC; PMC3393542; 22496220. DR EuropePMC; PMC3659425; 20976609. XX FH Key Location/Qualifiers FH FT source 1..5207 FT /organism="Helicobasidium mompa totivirus 1-17" FT /segment="large" FT /mol_type="genomic RNA" FT /db_xref="taxon:196690" FT CDS 200..2566 FT /codon_start=1 FT /transl_table=1 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:Q76L28" FT /db_xref="InterPro:IPR008871" FT /db_xref="UniProtKB/TrEMBL:Q76L28" FT /protein_id="BAC81753.1" FT /translation="MSSTSETNQVNYLAGVIANPRGGQMGQQYRSTVSTITTMAKVNSN FT ADSRSSVVKYEIGRRHDARRNAFAPYADEAIRVDVSYDTPAIMSETFAGLAKKYSNFSA FT SFERSSLAGIVERLAKVSRCKLLPRCYIGGFDRRARDPVTGLATHFTPVSSLDASVFIP FT RRIDTMTCPGVFAVLCAAVAGEGSQIVTDLIEINVGNNHPIVTTVDVAGLPAACVGALR FT VLGANMIAAGQGDLFGYAVARGIHQVVSVVGHTDEGGVMRDLLRVDGFGAPFGGIHFGL FT PVYTGLPHIDVGNDLQLSGWVDGIALSTAALVAHCDHGVVYNGTWFPTTLSGSAAAPVE FT PGLDAPAGDEGYVARNRNQLADELSPFSLNYANGLAKLFGAGTAGGLTVLHLSGRAGSL FT ADDCRHLNFATANPFFWIESTSILPANFLGTQAETEGRASYGGRCSNSSLPLWNQATCV FT SAVDSAVCEYTVEMASPRRVPFMLHWNGNPRNGLGNILPRQMDPMAIIQPGGAEARSIR FT ERMIANNDLASYLWTRGQSPIAAPGEFMNTSINVGILVKHCETTWDGAVLSHLPSPSEF FT TTGALWLQVGRPTGVAVGPLGKTNANERRARTAATNALLRARHLSRGHNLVAVNMLPLS FT FSAPSFGAPRVIETHDNINRAPPGGGSADTGVGVDRVVNAADAQGPLRPTGRTTSNGCP FT SRQGDQTWRVAVHGLSLSPSTLLRRCLEGGCATRSVAAACRRDSCTGPRNGGGAASGRG FT CRTVGPRMGPTTFRYSRHEAEAMQQDAALQAAGAQ" FT CDS 2563..5100 FT /codon_start=1 FT /transl_table=1 FT /gene="RDRP" FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:Q76L27" FT /db_xref="InterPro:IPR001795" FT /db_xref="UniProtKB/TrEMBL:Q76L27" FT /protein_id="BAC81754.1" FT /translation="MKALRAAQDKAGELGPLGSALLERVLAKPEVFERVSRGNIEEQNM FT EVANLQENGMGVDAAAFLSSLSFPIQVKLNQADIITLARLATDTRAYCPLINRTLDTAV FT ARKAGVRSAWTEREGHRLLNNVIGDVNVRKSTVPSEATPAATIKANLSLGRTLLCAPKV FT LGHSIIARIVWNMAGKCSSDVITAAILYTAALLPSHRNRSWRIAVAACLDPKAAKGLST FT AMKSLGANSVQEGAVLVEAQSLQGRMTGACDLAEEASYRCDARKVAEQVISADPEALRD FT SIRWVLNKELANGVDEYQSLDDFWSRRWLWCVNGSHTNASDAKVGIRRKVDLPGIDRVY FT RRMVAEALEEEPISCWDGTTFVSATQKLEHGKTRAIFACDTQNYFRVSHLLGPVQNRWR FT NERILLDPGEGGSLKMAHRMMDMRAAGGLNVMLDYDDFNSHHATETQKILFEELIKHVN FT YDPVLGKTLVDSFDKMYCYIKGVRVGQVLGTMMSGHRGTMFINSVLNAVYIRLATGAAF FT FDPLSSLHAGDDVYAVLPSLSDAKFLLDSCHNFGCRMNSTKQSVGVVCGEFLRMAVTPV FT GAIGYVCRSIASFISGNWSTDAPLTPREYLTNCISQCHTLFNRSNSMHLIQLISDCIHK FT RLNLKRKLCLEMMTGLAAPDGVPLFNTMYGRVYPIVPENWRRRGARFDCACEVHHATSQ FT YSSQHLPPVKVEALTETGTSAASAMQLASYKRAIDSMLSYEPRKVKFGKPRTMNALGLN FT LAKELFTHLLNTGCLEAMPVLRLIQDQIKRPLLRELVLLAGGDGGAADLEVEAWGPQTR FT KCSFFGWIPYSDAAALQKKADHIKIMNHTPVRM" XX SQ Sequence 5207 BP; 1196 A; 1383 C; 1494 G; 1134 T; 0 other; ttcctcagat ccctagtctg agccacgtgg ataacctttg gtaagggccc gctaaccagt 60 catcgtgctg gggtgcaaac catgctgcag cgctgtatac gtttaccggt gggggcaatg 120 cgtttagtct aggaggaggg ttccttagat cccgaaacga cgcattttct tatcaaacgt 180 ttaacacaaa cctatcacca tgagttccac ttctgagacc aaccaagtca attacttggc 240 aggagtgatc gccaaccctc gaggtgggca gatgggccag caataccgca gtacggtcag 300 caccatcacg acgatggcca aagtgaactc caacgcggac tccaggtcca gcgtggtcaa 360 atacgagatt ggccgccgcc acgatgcgcg tcgcaacgct ttcgcacctt atgcggacga 420 ggccatacgt gtcgatgtct cctatgatac gccagccatc atgagtgaga cttttgctgg 480 gctggccaaa aagtacagca atttcagtgc ttcgttcgag agatcgtcgc tcgctggaat 540 cgttgagcgg ctggcgaaag tgtcgcgctg caagctgcta ccccgatgtt acatcggggg 600 ctttgaccgg cgggcgcgcg atccggtcac ggggttggca acccacttca caccggtgtc 660 gtccctcgac gccagtgtct tcatccccag gcgcatcgat accatgacgt gcccgggggt 720 attcgctgtt ctatgcgcag cagtagcagg agagggcagt cagatcgtga ctgacctgat 780 cgaaatcaat gtgggtaaca accaccccat tgttactacg gtcgacgtag ctggcctccc 840 agcggcttgc gtcggtgcgc ttcgtgtcct gggagctaat atgatcgcgg ctgggcaagg 900 agatttgttt gggtatgcgg tcgcaagggg tattcatcag gtggtaagtg tagtgggcca 960 cactgatgag gggggagtga tgagagactt gttgcgcgtc gatggcttcg gcgcaccctt 1020 cggaggcatc catttcggat tgcccgtgta caccggcttg ccccatattg atgtgggcaa 1080 cgatctccaa cttagcggct gggttgatgg gatcgcactc tcgacagccg ccctggtcgc 1140 acactgtgac catggtgtag tatataacgg gacctggttc ccaaccactc ttagcggcag 1200 tgcagccgca cctgtggagc caggactcga tgctcctgcg ggcgacgaag gatacgtcgc 1260 tcgcaaccga aaccagttgg ctgatgaact gagccccttc agcctcaatt acgcaaacgg 1320 gctcgcaaaa ctctttggag caggcaccgc cggcggccta actgtgctcc acctctcagg 1380 ccgtgccggc agcctggccg acgactgccg tcacctcaat ttcgcgacgg ccaacccttt 1440 cttctggatc gagtccacat cgatcctccc ggccaacttt ctcggcacac aagccgagac 1500 agaaggtcgc gctagttacg gagggcgctg ctcaaacagc tcgctcccct tgtggaatca 1560 agcgacgtgc gttagcgccg tcgactccgc ggtgtgtgaa tacaccgtgg agatggcaag 1620 cccacggcgg gtaccgttca tgctccactg gaacggtaac ccgcggaacg ggctcgggaa 1680 catcctcccc aggcagatgg acccgatggc tattatccag cctgggggcg ctgaggcgcg 1740 gtcgatccgt gagaggatga tcgcgaacaa cgatctggcg tcgtacttgt ggactcgcgg 1800 gcaatcaccg attgctgctc cgggcgagtt catgaatacc agtatcaacg ttgggatact 1860 ggttaagcat tgtgagacaa cgtgggacgg tgcagtcctc agccacctcc cgagccccag 1920 cgaattcaca actggtgcac tctggctcca agtaggtagg cctactggag tagctgtcgg 1980 cccattgggc aaaacgaatg ccaacgagcg ccgcgcgcgt acagcggcca caaacgcatt 2040 gctccgtgct cgtcatctga gccggggcca caacctcgta gcagtcaaca tgctgcccct 2100 ctctttctcc gcgccctcct ttggcgctcc tcgggtcatt gagacccacg acaacatcaa 2160 ccgcgcacca ccgggtggcg ggtcagcgga cacgggggta ggtgtagaca gggtggtaaa 2220 tgcagcagat gcacaggggc ctttgaggcc aaccggacgc acgacgtcca acggctgccc 2280 cagccgacaa ggggaccaaa cgtggcgggt ggcggttcac gggctatccc tcagcccgag 2340 cacgctcctg aggcgatgcc tagagggggg ctgcgcaaca agaagcgttg ctgcagcgtg 2400 caggcgagat agctgcacag gacccaggaa tggcgggggg gcagcgagcg gtcgcggctg 2460 ccgaacagtt ggcccaagaa tggggccaac aacctttcga tatagccggc atgaggctga 2520 agccatgcaa caggacgcag ccctgcaagc tgcgggggct caatgaaggc actgcgcgcg 2580 gcccaagata aagcaggaga acttgggcca cttggcagcg cgctcctgga aagggtttta 2640 gcaaaacccg aagtgtttga gcgggtgagc aggggtaaca ttgaggagca gaatatggag 2700 gtcgctaacc ttcaggagaa cggtatgggt gtggatgcgg cagcttttct ctcctcgctc 2760 tcctttccta ttcaagttaa acttaatcag gcagacataa ttactttagc tcgtctggct 2820 acggataccc gggcgtattg cccgttaatc aaccgaaccc tagacacggc tgtggctcgt 2880 aaagcgggcg taagatcagc ttggacggaa cgcgaaggcc accgtcttct caacaacgtc 2940 attggggatg tcaacgtacg caaatcaact gttcccagtg aagcgacacc tgcggctacc 3000 atcaaggcta atttaagctt gggtcgcacg ctactatgcg caccaaaggt gttagggcac 3060 tcaatcattg cccgcatagt ctggaacatg gccggtaaat gtagctcgga tgttataacc 3120 gcagctatcc tttacacggc cgcgctacta ccatcgcacc gcaacagaag ttggcggatc 3180 gcggttgcag catgcctcga ccccaaggct gctaaagggc tttcaacagc catgaaaagt 3240 ctgggtgcaa actcggtcca ggaaggtgca gtcctggttg aggctcagag cttgcagggg 3300 cggatgaccg gtgcttgcga tctagcggag gaagcaagct accggtgcga tgcgcggaag 3360 gtggcagaac aagtaatctc tgccgatccc gaggcactaa gggactcgat ccgttgggtt 3420 ctaaataaag agcttgccaa cggggtggat gagtaccaga gtctagatga cttttggtcg 3480 cgcaggtggt tatggtgcgt aaatggttct cacaccaacg ctagcgatgc caaggtgggc 3540 attaggagga aagtggatct gccgggaata gatagagtgt acaggcggat ggtggctgag 3600 gctctagagg aggagcctat tagttgttgg gatggtacga ccttcgtatc tgctactcag 3660 aagctggaac atggcaagac cagagctatc ttcgcctgtg acacccaaaa ctattttcgc 3720 gttagccacc tgctaggccc ggttcagaac cgctggcgga acgaacgtat actgctcgac 3780 ccaggggaag gcggctcgct gaaaatggcc cataggatga tggacatgcg agccgcgggg 3840 ggtttgaacg tgatgttgga ctatgacgat ttcaactcgc accatgctac cgagacgcag 3900 aagattttgt tcgaagaact gatcaagcat gtcaactacg atcctgtact tggcaagaca 3960 ttagtcgata gctttgacaa gatgtactgc tacataaaag gtgtgagggt cgggcaggtc 4020 cttggaacga tgatgagcgg tcacaggggc actatgttca taaattctgt tcttaatgct 4080 gtatatattc gtttggcaac cggagcagcg ttctttgatc ctctaagcag cctacatgca 4140 ggcgatgatg tatatgccgt tcttccttcc ctctctgatg ctaagtttct tctagattca 4200 tgccataatt tcggctgtcg catgaactcc accaagcagt ctgttggtgt ggtttgcggc 4260 gaatttctca ggatggcggt cacacccgtt ggcgcaatcg gctacgtctg ccgttccatc 4320 gcatcattca ttagcgggaa ctggagtacc gatgcacctc ttacgccacg tgaatatttg 4380 actaattgta tttctcaatg ccatactctc tttaaccgtt ccaattctat gcatttgatc 4440 cagcttattt ctgattgtat tcataagcga cttaatctaa agcggaagct atgcttggag 4500 atgatgaccg ggctagcggc tccagatggt gttccactct ttaacaccat gtatggacgt 4560 gtgtatccta ttgtgccgga gaattggagg aggagaggag cgaggttcga ctgcgcttgc 4620 gaggtgcatc acgcgaccag ccaatatagc agtcaacatc ttccccccgt caaggttgaa 4680 gccttgactg aaactggcac tagtgcagcg tcggcgatgc aattggccag ctataaacgc 4740 gcaattgata gcatgctaag ttatgaaccg cgcaaagtca agtttggaaa accgaggacg 4800 atgaatgctc taggtctgaa cctagccaag gaacttttta cgcacctgct aaacacgggg 4860 tgccttgaag caatgccagt acttaggctt attcaagatc agatcaagcg tccacttctt 4920 cgtgagttgg tcttactcgc tggaggtgac gggggtgcag cagacctaga agtcgaggct 4980 tggggacctc aaacccgaaa gtgttccttc ttcggatgga ttccctactc agacgcagcc 5040 gcattacaga agaaggcgga ccacattaaa ataatgaacc acaccccggt caggatgtga 5100 gtgtgttatt ataccttcga agcagtttcg cgcataaagt gctaccctat caggagccca 5160 ggattgacca tcctgtttta cattaaagcc cgaaagggcc taaatag 5207 //