ID AB085793; SV 1; circular; genomic DNA; STD; VRL; 2739 BP. XX AC AB085793; XX DT 21-JAN-2003 (Rel. 74, Created) DT 13-DEC-2008 (Rel. 98, Last updated, Version 6) XX DE Squash leaf curl Philippines virus DNA-A, complete sequence. XX KW . XX OS Squash leaf curl Philippines virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2739 RA Ikegami M.; RT ; RL Submitted (25-MAY-2002) to the INSDC. RL Contact:Masato Ikegami Graduate school of Tohoku university, Department of RL Life Science; 1-1 Tsutsumidori-Amamiyamachi, Aoba-ku, Sendai, Miyagi RL 981-8555, Japan XX RN [2] RX DOI; 10.1046/j.1439-0434.2003.00764.x. RX AGRICOLA; IND43622492. RA Kon T., Dolores L.M., Bajet N.B., Hase S., Takahashi H., Ikegami M.; RT "Molecular characterization of a strain of Squash leaf curl China virus RT from the Philippines"; RL J. Phytopathol. 151(10):535-539(2003). XX DR MD5; b832610f77d62c6ed8e215026b662956. DR EuropePMC; PMC3550763; 23637479. XX FH Key Location/Qualifiers FH FT source 1..2739 FT /organism="Squash leaf curl Philippines virus" FT /segment="A" FT /host="Cucurbita moschata" FT /mol_type="genomic DNA" FT /country="Philippines" FT /db_xref="taxon:269277" FT CDS 125..463 FT /codon_start=1 FT /transl_table=1 FT /gene="AV2" FT /db_xref="GOA:Q80IX4" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q80IX4" FT /protein_id="BAC55514.1" FT /translation="MWDPLMHEFPESVHGLRCMLAVKYLQEVEKTYSPDTVGYDLVRDL FT ILVLRARNYVEATSRYYHFNSRVEGTPTSQLRQPLCFPCSCPHCPRHKGKGLDKQAHEQ FT KTQDVQDV" FT CDS 285..1055 FT /codon_start=1 FT /transl_table=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:Q80IX3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q80IX3" FT /protein_id="BAC55515.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAVVPIARVTKGKAWT FT NRPMNRKPKMYRMYRSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCISDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVIFFLVRDRRPTGTPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGAYASREQALVRKFVRVNSYIVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(1052..1462) FT /codon_start=1 FT /transl_table=1 FT /gene="AC3" FT /product="replication enhancer" FT /db_xref="GOA:Q80IX2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q80IX2" FT /protein_id="BAC55516.1" FT /translation="MITDSRTGEYITADRAESGVYIWDVPNPLYFKIMKHDIRPCLEEH FT DIIKVHIMFNHNLRKALGLHKCVLMFQIWTGLRPQTGIFLRVFKTQVLKYLDMLGVISI FT YNVIRAVYHVLDNVLEKTIDVWITYDVKLNIY" FT CDS complement(1197..1601) FT /codon_start=1 FT /transl_table=1 FT /gene="AC2" FT /product="transcriptional activator protein" FT /db_xref="GOA:Q80IX1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q80IX1" FT /protein_id="BAC55517.1" FT /translation="MQSLSHSKNHSIPVAKESQPQRKKKNIRRRRIDLPCGCSYYMSIN FT CHDHGFTHRGVHHCGSSREWRVYLGRSKSPLFQNNETRHQTLPGRTRHNQSAHHVQPQP FT AESTGASQMCSNVPDLDGLTPADWDFLESL" FT CDS complement(1504..2583) FT /codon_start=1 FT /transl_table=1 FT /gene="AC1" FT /product="replication-associated protein" FT /db_xref="GOA:Q80IX0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q80IX0" FT /protein_id="BAC55518.1" FT /translation="MAPPKRFRIQAKNYFLTYPKCSLTKEEALSQLQTLETPTSKKFIK FT ICRELHEDGSPHIHVLIQFEGKFVCTNNRFFDLVSPSRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGKFQVDGRSARGGQQSANDTAAKALNSGSAEAALAIIREELPKDFIFQYH FT NIKNNLDRIFAPPVEVYVSPFSISSFDKVPQELVDWVSGNVVCSARPIRPIGIVLEGDS FT RTGKTAWARSLGTQLLVRPLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS FT NTKYGKPVMIKGGIPTIFLCNPGPNSSYKEYLDEDKNAALKQWALKNAIFITLEEPLYS FT GRERIATAEEEEEHQAQTN" XX SQ Sequence 2739 BP; 739 A; 591 C; 603 G; 806 T; 0 other; taatattacc ggatggccgc cctttttttt atgtgggccc tcgaccaatg aaattcacgc 60 tacatggctt ctttattaca tggggaccat taaatagact tccgcaccaa gttttgatca 120 caacatgtgg gatccactta tgcacgaatt ccctgaaagt gttcatggtc tacggtgcat 180 gctagctgtg aaatatcttc aggaggtgga aaaaacatat tctccggaca cagtcggcta 240 cgatcttgtt cgcgatctta ttcttgttct ccgcgcaagg aactatgtcg aagcgaccag 300 ccgatattat catttcaact cccgcgtcga aggtacgccg acgtctcaac ttcgacagcc 360 cctatgtttc ccgtgcagtt gtccccattg cccgcgtcac aaagggaaag gcctggacaa 420 acaggcccat gaacagaaaa cccaagatgt acaggatgta tagaagtccc gacgtgccaa 480 ggggctgtga aggcccttgt aaagttcaat cgttcgaatc taggcacgat gtctctcata 540 ttgggaaggt aatgtgtatc agcgatgtta cacgaggaac cggactcaca catcgcgttg 600 ggaagcgatt ttgtgtgaaa tctgtttatg ttttgggaaa gatatggatg gatgaaaata 660 tcaagactaa aaatcatact aatagtgtca tattttttct ggttcgagac cgtcgtccta 720 cagggacccc tcaggatttt ggggaggttt ttaatatgtt cgacaatgaa ccgagcactg 780 caacggtgaa gaacatgcat cgtgatcgat accaagttct gcgcaaatgg catgctactg 840 tgacgggagg agcatacgca tcaagggagc aagcattagt taggaagttt gttagagtta 900 atagttatat tgtctacaat caacaagagg ccggcaagta tgagaatcat actgaaaatg 960 cattaatgtt gtatatggcc tgtactcatg catcgaaccc tgtatacgcg actttgaaaa 1020 tccggatcta tttttatgat tcggtaacaa attaatatat attcaatttc acatcatacg 1080 ttatccatac atcaattgtc ttttccaaca cattgtccag aacatgataa acagctctta 1140 ttacattgta aatactaatc acccctaaca tgtccaagta cttaaggact tgggttttaa 1200 agactctcaa gaaaatccca gtctgcgggc gtaagcccgt ccagatctgg aacattagaa 1260 cacatttgtg aagccccagt gctttccgca ggttgtggtt gaacatgatg tgcactttga 1320 ttatgtcgtg ttcttccagg caaggtctga tgtcgtgttt cattattttg aaatagaggg 1380 gatttggaac gtcccagata tacacgccac tctctgctcg atccgcagtg atgtactccc 1440 ctgtgcgtga atccgtgatc atggcaattt attgacatgt aatacgagca tccgcacggt 1500 agatcaattc gtctgcgcct gatgttcttc ttcttcctct gcggttgcga ttctttcgcg 1560 accggaatag agtggttctt cgagtgtgat aaagattgca ttctttaatg cccactgctt 1620 aagtgctgca ttcttatctt catcgagata ctctttataa ctgctgtttg gtcccggatt 1680 gcagaggaag atggtgggaa ttccaccttt aatcatgact ggctttccgt acttcgtgtt 1740 gctttgccag tctctctggg cccccatgaa ttctttaaaa tgctttagat agtgggggtc 1800 tacgtcatca atgacgttgt accaagcatc attactgtac acctttggac ttaagtcaag 1860 tggccgcaca agtaattgtg tccccaaaga acgcgcccac gcagttttgc ccgttctact 1920 atcaccctct aaaactattc ctatgggtct aatcggccgc gcagaacaca ccacgttacc 1980 tgaaacccaa tcgacgagtt cttgcggaac tttgtcgaag gatgaaatag aaaaaggaga 2040 aacatacacc tctacaggag gtgcaaaaat cctatctaaa ttatttttaa tattatggta 2100 ttgaaaaata aaatcttttg gtagttcttc cctaattatt gctaaagctg cttcggctga 2160 acctgaattt aatgcctttg cggcagtgtc gttagcagac tgctgaccgc ctctagcgct 2220 tctgccgtcg acctggaatt ttccccattc cagtgtgtcc ccatctttgt cgatatagga 2280 cttgacgtcg gagctggatt tagctccctg aatgttcgga tggaaatgtg ctgaccgact 2340 tggggacacc aagtcgaaga atctgttatt cgtgcagacg aacttccctt cgaactggat 2400 aagaacgtgg atatgcggag acccatcttc gtgcaactct ctacaaattt tgataaattt 2460 ctttgaagtt ggagtttcta gggtttgtaa ttgggaaagt gcctcttctt tagtaagaga 2520 gcatttggga taagtgagga aatagttttt ggcttgtatt ctaaaacgct ttggaggtgc 2580 catgtcagca gaaacgaatt ggagacaagc aaacttccca tatgaattgg agacaggagc 2640 acaatatata tggtgtctct aaatggcatt ttggtaatta ttccaataat tactttaatt 2700 caaaattcaa aattggaatt ggtaaagcgg ccatccgtc 2739 //