ID AB084453; SV 1; linear; genomic RNA; STD; VRL; 3372 BP. XX AC AB084453; XX DT 26-MAY-2005 (Rel. 83, Created) DT 01-JUN-2005 (Rel. 84, Last updated, Version 2) XX DE Gentian mosaic virus RNA2 gene for polyprotein, complete cds. XX KW . XX OS Gentian mosaic virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Fabavirus. XX RN [1] RP 1-3372 RA Kobayashi Y.O.; RT ; RL Submitted (30-APR-2002) to the INSDC. RL Yuki Ohdaira Kobayashi, National Agricultural Research Center for Hokkaido RL Region, Crop Environment Research Team; Shinsei, Memuro, Hokkaido, RL 082-0071, Japan (E-mail:oodaira@affrc.go.jp, Tel:81-155-62-9276, RL Fax:81-155-61-2127) XX RN [2] RX DOI; 10.1094/PHYTO-95-0192. RX PUBMED; 18943990. RA Kobayashi Y.O., Kobayashi A., Hagiwara K., Uga H., Mikoshiba Y., Naito T., RA Honda Y., Omura T.; RT "Gentian mosaic virus: A New Species in the Genus Fabavirus"; RL Phytopathology 95(2):192-197(2005). XX DR MD5; 72807b593018fc929598bad72f87f88d. XX FH Key Location/Qualifiers FH FT source 1..3372 FT /organism="Gentian mosaic virus" FT /isolate="N-1" FT /mol_type="genomic RNA" FT /db_xref="taxon:182452" FT CDS 184..3246 FT /codon_start=1 FT /transl_table=1 FT /gene="RNA2" FT /product="polyprotein" FT /db_xref="GOA:Q4W8R5" FT /db_xref="InterPro:IPR003181" FT /db_xref="InterPro:IPR003182" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q4W8R5" FT /protein_id="BAD99002.1" FT /translation="MISMLILFLFSFSFVTLYLYVAWKFVLRPVITLHFENSIQYIDPY FT TYKYHFRHSFDSELKQIFKWTLHFSFPYQGESKFSPKYTLSEMEREYASVTPAHVVPKD FT VLLKRAGDYKLAKEGRRSILPSITELYEIGKFNRVSSLLRKNMPAFIQTSEMQAGVIKG FT DGNGLIKVPIVNHYEEERADTRLHPETRAKADQIMVAAVEIVNDGFASVNSDITLAGAL FT YDKRHKTLKNSFKGAYASRLGGEPSHIVFYPTHRVPSFDDPNETLELSLVSRDTDFEEQ FT STLANISVRTVYVRARGPEKVTETRHLLAAKVEDTIKAQQFASENEVVLATPRLYPKVN FT LDNYALPRTRNVVQSFGRYDHNGIVFRRPKFTEAGVVLNATGPIKLGDIAPGNSSKEPL FT QHFEEGLGSLSDEDAEDYKEGQALMEEETLEACTNMFPLEGIPETMRLLFSGATTIPLN FT VTVGTKLTVIYLNDLAKHNGVHNQLLNMVGKIPGSLKCKIFCEVSPATGIGLVISYVEG FT NESLSLGNNLGRLLGIQHRKWNPAIEPSIDFLVKPFSCCDWWNMHYLGSAKYAPVITIL FT CLDKWFNAPKTEGRISFALYFEPEVILPKQIATLHETPGFMLRKELGNISFPQGSRKAY FT QFEVNFGKPQVEGTSVTMNFASAYCGLSQFMQADVILDLLLMSSPMMGATFTVALICGS FT KVKHLGNLQTLDSLPHITFTFSKGGSSSRSLRFKKELFPTLMTLDRWELDGDKTEEVGF FT YFVIYQRDNVSSSLEGDMVLGVSARSSGAVQLYGVSSGYPTMATRSTRGKTGVRDLGMK FT IRKPIGYKQGQAHTLQTEFENVFYPVGFWKYEEGKYEGSRGESDISTHYLKMRLDGTKS FT SEGFKILHSPFVRLLQNCAWFRGTLEWKVVVLANSEMMNYRRTSQAVITAHESSLSSNE FT FFSEVIMGASGEVRFKRSVVGTVDGFKSMGWDVQGEKKFYKLCIALGNIHEYSAVNVYG FT RFLPDVEFAGQQKAGHYMLDKSVAIFKEISY" XX SQ Sequence 3372 BP; 1018 A; 613 C; 754 G; 987 T; 0 other; gtttaaataa aatatttaaa caaacagctt tcgtccggtt acccgctttc ggttactttt 60 aaacagcttt cagaacagct ttcaaaaccc aaacagcttt caaaccccat gcgaaacacg 120 tttagcaata acaacaaata ttgctagaca ttctttcaac tctgcaaaat cagattgata 180 tttatgatat caatgctgat tttgtttctc ttctcttttt ctttcgtaac gttgtattta 240 tacgttgcct ggaagttcgt gctgcgacct gtaatcactt tgcattttga gaatagtata 300 cagtatattg atccttacac atacaagtac catttcagac attcttttga cagtgaactc 360 aaacagatct ttaagtggac tttgcatttt tccttcccgt atcaaggaga aagtaaattt 420 tcgccaaaat acactcttag tgagatggaa agagaatatg ctagtgtcac accagctcat 480 gtggtcccta aggacgtttt gcttaaacgt gctggggatt acaaacttgc aaaagaagga 540 cgacgctcca ttttgccaag cataactgaa ttatatgaaa ttggcaaatt caacagagta 600 tcctccctac ttaggaagaa tatgccagct tttatccaaa catctgagat gcaagctggg 660 gtgattaaag gagatgggaa tggactcata aaagttccca ttgttaatca ctatgaggag 720 gaaagggcag acactcggtt gcatcctgaa acaagagcaa aagctgacca gataatggta 780 gcagcagttg agattgtcaa tgatggattc gcatctgtca attcagacat tactcttgca 840 ggtgctcttt atgacaagag acataagaca ctcaagaatt cattcaaggg tgcttatgca 900 tctagattgg gaggtgaacc aagccacatt gtgttttacc ccacccatcg cgtgccttca 960 tttgatgatc ctaatgaaac tctggaattg tcattggtta gcagagatac agatttcgag 1020 gaacaatcta cgctagccaa tatttcagtg cgtactgtct atgtcagagc cagaggtcca 1080 gaaaaggtta cagaaacaag acatttgcta gcggcaaaag tggaagatac aatcaaagct 1140 cagcaatttg ctagcgagaa tgaagtggta ttggcgactc ctcgtcttta tccaaaagtc 1200 aatttggaca attatgcact accgcggaca aggaatgtgg ttcaatcttt tggtcgttat 1260 gaccacaatg gaatagtatt ccgacgacca aaattcacag aagcaggagt agtgctaaat 1320 gccacagggc ccatcaaatt aggtgatata gcgccaggga attcttcaaa ggaaccctta 1380 caacactttg aagaaggact aggctctttg tcagatgaag atgctgaaga ctataaagaa 1440 ggccaagccc tgatggaaga ggagaccttg gaagcgtgca caaacatgtt tcctctggaa 1500 ggtattcctg aaactatgcg cttactattt tcaggggcca ccacaatacc cctgaatgtc 1560 actgttggta caaaattaac tgtgatttat ctgaatgatt tggccaagca taatggggta 1620 cataatcaat tgctgaatat ggtagggaag atccctggct cattgaagtg caagattttc 1680 tgtgaagtgt ccccagcgac tggaataggt cttgtcattt cttatgttga aggaaatgaa 1740 agtctaagtc tgggcaacaa tcttgggagg ttgttaggaa tacagcatag aaaatggaat 1800 ccagctatag agccttccat agattttttg gtcaaaccct tctcgtgctg tgattggtgg 1860 aacatgcact acttaggtag tgctaagtat gcacctgtga taacaatttt gtgtttggac 1920 aaatggttca atgcacctaa gactgagggt agaatttcat tcgcacttta ttttgagcct 1980 gaggttattc taccaaaaca aattgcaacg ctgcatgaaa cacctggttt tatgctaaga 2040 aaggaacttg gaaatataag ctttcctcaa ggttctagga aagcttacca atttgaagtg 2100 aattttggaa agcctcaagt cgagggcaca tctgtgacaa tgaattttgc gtctgcatat 2160 tgtgggctca gccagttcat gcaagctgac gttattctag acttacttct tatgagcagc 2220 ccaatgatgg gagcaacttt tactgtggct ctcatttgtg gcagtaaagt caaacatctt 2280 ggaaatttgc agacactgga ttcattgccc cacattactt tcaccttcag caaaggaggt 2340 tctagttccc gtagtctacg ttttaagaaa gaattatttc ccactttaat gactttggat 2400 agatgggaat tagatggaga taagacagag gaagtgggct tctattttgt catttatcag 2460 cgagataatg tgtcctcttc tctagaagga gacatggttt tgggggtttc tgccagaagt 2520 tctggagctg tacaattgta tggtgttagc tcaggctatc cgactatggc aacacgtagc 2580 acgcgaggca aaactggtgt gcgtgatctt ggcatgaaaa tacgcaagcc cattgggtac 2640 aagcaaggtc aagcacacac cctccaaacg gaatttgaaa atgtatttta ccctgtgggt 2700 ttttggaaat atgaagaggg caaatatgaa ggaagtaggg gggagagtga catttccacg 2760 cactatctca agatgcgcct agatggtact aagagcagtg aaggctttaa aatattgcat 2820 agtccttttg tgcgattatt gcagaattgc gcatggttca gagggactct tgaatggaaa 2880 gtcgtggtgc tggcaaattc tgaaatgatg aactacagaa gaacttccca ggcagtaata 2940 acagctcatg agagcagtct tagctctaat gaattcttta gcgaggttat catgggagca 3000 agtggtgagg tcagattcaa aagaagtgtg gtaggcacag ttgatggttt caaatcaatg 3060 ggatgggatg tgcaaggcga aaagaaattt tataagctgt gcattgcctt gggcaacatc 3120 cacgaatatt ctgctgtcaa tgtgtatggt agattccttc cagatgtgga atttgcagga 3180 caacaaaagg ctgggcatta catgttagat aaaagtgtag ccatttttaa agaaatatcg 3240 tactgattca attagcttgg ttgtgttgtg tgatttcttt ctttatgata ttttagtata 3300 atatagaata aatttaaaag tgtgttgtgt gctttgaatt ttactttgta aaataattta 3360 tgtttttata tc 3372 //