ID AB079889; SV 1; linear; genomic RNA; STD; VRL; 3356 BP. XX AC AB079889; XX DT 22-MAY-2012 (Rel. 112, Created) DT 22-MAY-2012 (Rel. 112, Last updated, Version 1) XX DE Cucumber mosaic virus RNA1, complete sequence, strain:36a1. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3356 RA Natsuaki T.; RT ; RL Submitted (16-FEB-2002) to the INSDC. RL Contact:Tomohide Natsuaki Utsunomiya University, Faculty of Agriculture; RL Mine-machi 350, Utsunomiya, Tochigi 321-8505, Japan XX RN [2] RA Suzuki M., Nakazono E., Natsuaki T., Kosaka Y., Okuda S.; RT "Cucumber mosaic virus (CMV) 36a1"; RL Unpublished. XX DR MD5; d1997a8cb34375d62bb4dea319fc246c. XX FH Key Location/Qualifiers FH FT source 1..3356 FT /organism="Cucumber mosaic virus" FT /segment="1" FT /strain="36a1" FT /mol_type="genomic RNA" FT /db_xref="taxon:12305" FT CDS 96..3077 FT /codon_start=1 FT /transl_table=1 FT /product="1a protein" FT /db_xref="GOA:I4DD48" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR021002" FT /db_xref="InterPro:IPR022184" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:I4DD48" FT /protein_id="BAM15838.1" FT /translation="MATSSFNINELVASHGGKGLLATALVDKTAHEQLEEQLQHQRRGR FT KVYIRNVLGVKDSEVIRNRYGGKYDLHLTQQEFAPHGLAGALRLCETLDCLDSFPSSGL FT RQDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHAERLMNMRKIILNDPQQFDGRQ FT PDFCTQPAADCKVQAHFAISIHGGYDMGFRGLCEAMNAHGTTILKGTMMFDGAMMFDDQ FT GVIPELNCQWRKIRSAFSETEDVTPLSGKLNSTVFSRVRKFKTMVAFDFINESTMSYVH FT DWENIKSFLTDQTYSYRGMTYGIERCVIHAGIMTYKIIGVPGMCPPELIRHCIWFPSIK FT DYVGLKIPASQDLVEWKTVRILMSTLRETEEIAMRCYNGKKAWMEQFKVILGVLSAKSS FT TIVINGMSMQSGERIDINDYHYIGFAILLHTKMKYEQLGKMYDMWNASSISKWFAALTR FT PLRVFFSGVVHALFPTLRPREEKEFLIKLSTFVTFNEECSFDGGEEWDVISSAAYVATQ FT AVTDGKILAAQKAEKLAEKLAQPVIEVSDSPEAPSQTPDDTAEVCGKEREVSELDSLSA FT QTRSPITRVAERATAMLEYAAYEKQLHDTTVSNLKRIWNMAGGDDKRNSLEGNLKFVFD FT TYFTVDPMVNIHFSTGRWMRPVPEGVVYSVGYNERGLGPKSDGELYIVNSECVICNSES FT LSTVTRSLQAPTGTISQVDGVAGCGKTTAIKSIFEPSTDMIVTANKKSAQDVRMALFKS FT SDSKEACTFVRTADSVLLNECPTVSRVLVDEVVLLHFGQLCAVMSKLKAVRAICFGDSE FT QIAFSSRDASFDMRFSKIIPDETSDADTTFRSPQDVVPLVRLMATKALPKGTRSKYTKW FT VSQSKVKRSVTSRAIVSVTLVDLDPSRFYITMTQADKASLISRAKEMNLPKTFWNERIK FT TVHESQGISEDHVTLVRLKSTKCDLFKQFSYCLVALTRHKVTFRYEYCGVLNGDLIAEC FT VARA" XX SQ Sequence 3356 BP; 846 A; 743 C; 821 G; 946 T; 0 other; gttttattta caagagcgta cggttcaatc cctgcctccc ctgtaaaact accctttgaa 60 aacctctcat tcttaatctt ttctttgtaa ttcctatggc gacgtcctcg ttcaacatca 120 atgaactggt agcctcccac ggcggtaaag gactactcgc gaccgccctc gttgataaga 180 cagctcatga gcagctcgag gagcaattac agcatcaacg tagaggccgt aaggtctaca 240 tccggaacgt attgggtgta aaggattccg aggtcatccg gaatcggtat ggaggaaagt 300 acgacctcca tcttacccag caggagtttg ctccccacgg cctagctggt gccctccgct 360 tgtgtgaaac tctcgattgt ctagactctt tcccttcatc aggtctgcgg caggacctcg 420 tcttagactt cggaggaagt tgggtcacac attacctccg cggacataac gtacattgtt 480 gttccccttg tttgggtatc cgcgataaaa tgcgccatgc ggaacgttta atgaacatgc 540 gcaagatcat cttgaacgat ccacaacagt tcgatggtcg acagccggat ttctgcactc 600 aaccggctgc ggattgcaaa gtacaagccc actttgctat atctattcat ggaggttatg 660 atatgggctt cagaggatta tgtgaagcga tgaacgctca cggaaccact attttgaagg 720 gaacgatgat gttcgatggt gcgatgatgt ttgacgatca aggtgtaatt cccgaactta 780 attgtcagtg gaggaagatc aggagtgctt tctccgaaac tgaagacgtc acaccgttgt 840 ctggtaagct taattccaca gtattctccc gcgtgcggaa attcaagact atggtagctt 900 tcgatttcat taacgagtct accatgtcct atgttcatga ctgggagaat ataaaatctt 960 ttcttacaga ccagacttat tcataccgag ggatgactta cggtattgaa cgctgtgtta 1020 ttcacgccgg catcatgacg tacaagatta tcggtgtacc tgggatgtgt ccacccgaac 1080 tcattcgaca ttgtatttgg ttcccctcca ttaaagacta tgttggtctg aagattcccg 1140 cgtcgcagga tttggttgag tggaagacag tgcggatttt aatgtcaaca ttacgtgaga 1200 ctgaagagat tgccatgagg tgttataatg gtaagaaagc gtggatggaa caatttaagg 1260 ttatcctagg tgtcctatct gcgaaatcat ctaccattgt tatcaatggt atgtccatgc 1320 aatctggcga gcgaatagat attaatgact atcattacat cggtttcgcc attcttcttc 1380 acacaaaaat gaagtatgaa caacttggaa aaatgtatga tatgtggaat gcttcgagca 1440 tctcgaagtg gttcgcagcg ttgacccgtc cgctgcgtgt gttcttctcc ggtgttgttc 1500 acgcgctgtt cccgactttg agaccccgcg aggaaaaaga attcctgatc aagctctcca 1560 ccttcgtgac ttttaatgaa gagtgctcat ttgacggtgg agaggaatgg gacgtgatat 1620 catctgctgc atacgttgcc acgcaggctg ttactgatgg gaaaattttg gctgcgcaga 1680 aagccgagaa gcttgctgag aagcttgcac aacccgtgat agaggtatca gacagcccag 1740 aggcgccttc tcaaacgcct gatgatactg ctgaagtttg tggaaaggag cgagaggttt 1800 cggaactcga ctccttgtca gctcagacac gttcccccat cactagagtt gctgaaaggg 1860 ctactgccat gttagagtat gccgcttatg agaaacaatt acatgacacc acggtgtcta 1920 atttaaaacg tatttggaac atggcgggtg gtgatgacaa aagaaactcc ctagagggta 1980 acttgaagtt cgttttcgat acgtatttta ccgttgatcc tatggtgaac attcatttct 2040 ccacgggtcg gtggatgcgt cctgtgcccg agggtgttgt ctattctgtt ggttataatg 2100 aacgcggttt aggtccgaag tctgatggag agctatatat tgtcaatagt gaatgcgtga 2160 tttgcaacag tgagtcttta tctaccgtca cgcgttctct tcaagctcca accggaacca 2220 ttagtcaagt tgacggagtt gctggttgcg ggaaaaccac ggcaattaag tccatttttg 2280 aaccgtctac tgacatgatt gttaccgcga acaagaagtc cgcccaagat gtacgtatgg 2340 cacttttcaa atcgtcggat tccaaagaag cttgcacttt cgttcgaaca gccgattctg 2400 tcctacttaa tgaatgtccg actgttagta gggttttggt tgatgaggtt gtgttattgc 2460 actttggtca attgtgtgcc gtcatgtcca agttgaaggc cgtgcgagcc atatgttttg 2520 gggattcgga gcagattgct ttttcctcgc gagatgcctc atttgacatg cgtttctcta 2580 agatcattcc tgatgaaact agtgatgcgg acactacatt ccgtagccca caagatgtcg 2640 tgccgcttgt gcgtttaatg gctacgaagg cccttccgaa aggaacccgt tcaaaataca 2700 cgaaatgggt ttctcagtct aaagtgaaaa gatctgttac atctcgcgcc atcgttagtg 2760 tgacactggt tgatttggat ccttccaggt tttatataac gatgacccaa gctgataagg 2820 cttcactgat ttcaagggcg aaagagatga atttaccaaa gaccttctgg aacgaaagga 2880 ttaaaaccgt gcatgagtct caaggtatct ctgaagatca cgttactttg gtaagattaa 2940 agagcacaaa gtgtgacttg tttaaacagt tttcttattg tcttgtcgca ttgactagac 3000 acaaagtcac gttccgctac gagtactgcg gtgtattaaa cggtgattta atcgccgaat 3060 gtgttgctcg tgcttagcgg tgttcctctt cgggcgggat ctgagttggc ggtgatctgc 3120 aaaccgtctg aagtcactaa acacatcgtg tggtgaacgg gttgtccatc cagctaacgg 3180 ctaaaatggt cagtcgtgga gaaatccacg ccagcagatt tacaaatctc tgaggcgcct 3240 ttgaaaccat ctcctaggtt tcttcggaag gacttcggtc cgtgtacctc tagcacaacg 3300 tgctagtttc agggtacggg tgcccacctt tcgtgggggc ctctaaaagg agacca 3356 //