ID   AB079774; SV 1; linear; genomic RNA; STD; VRL; 1183 BP.
XX
AC   AB079774;
XX
DT   16-AUG-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
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DE   Japanese yam mosaic virus gene for polyprotein, partial cds, isolate:O1.
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KW   .
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OS   Japanese yam mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
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RN   [1]
RP   1-1183
RA   Fuji S., Nakamae H., Furuya H., Naito H.;
RT   ;
RL   Submitted (12-FEB-2002) to the INSDC.
RL   Shin-ichi Fuji, Akita Prefectural University, Faculty of Bioresource
RL   Sciences; 241-7 Kaidobata Nishi Shimoshinjo Nakano, Akita, Akita 010-0915,
RL   Japan (E-mail:sfuji@akita-pu.ac.jp, Tel:81-18-872-1640, Fax:81-18-872-1678)
XX
RN   [2]
RA   Fuji S., Nakamae H., Furuya H., Naito H.;
RT   "High diversity of the 5'-UTR, P1 and CP genomic regions of several
RT   Japanese yam mosaic virus and heterogenous population in a yam plant";
RL   Unpublished.
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DR   MD5; fb7bc8eab908548dfbefcb35a783b57b.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1183
FT                   /organism="Japanese yam mosaic virus"
FT                   /isolate="O1"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:79917"
FT   CDS             155..>1183
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /note="5'-terminal region"
FT                   /note="first protein and helper component regiion"
FT                   /db_xref="GOA:Q8JW14"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="InterPro:IPR006186"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JW14"
FT                   /protein_id="BAC07497.1"
FT                   /translation="MATCIETLAVTNLNNKFTFQLQFGTLPPVSIDTPVTTYETIAMDK
FT                   EQEKINQNKSIELRNEVNANKAFINKMKSEYIKQCTVLDKWEEEYNRIRSKNPDSYKIV
FT                   LTKQQRRAMLKRSVAETHKKLKEEKDILDRCIIGPWGPPMNTLSIASGPLPSTMETQVK
FT                   WPLHQTRSQRIREAPRQPIKLGQGQFTKIIRELTALMVEKSFGLELCDTHMQKVSIQKL
FT                   HKKAYLKMNTMHEKGFNRARDIVVDKFTQRALESMVTYTSGNNRHSVHSIKPGSSGFVL
FT                   NRKALHGAQSRAYGEIFIIRGNHEGKLYDARIKLSQTIRRKITHYSDPGCLNSWNGFNT
FT                   TFQ"
XX
SQ   Sequence 1183 BP; 430 A; 253 C; 238 G; 262 T; 0 other;
     aaaatataaa atctcaacaa gaatcaacga aaactaagac aacaaactct ttgttaacgt        60
     ttgcttctaa acactcggat tctaaatcca aaccacgcaa tccgcaaaga atcgtgcgtt       120
     ccggtctttg cattccagac tcacacaaac aatcatggca acatgcattg aaacactcgc       180
     agtgacaaac ctgaacaaca aattcacatt ccagcttcag tttggaacac ttccacctgt       240
     gtctatcgac acacccgtta ccacctatga aacaatagca atggataagg agcaggaaaa       300
     gataaaccaa aacaagtcca ttgaactgcg caacgaagtg aatgcgaata aggcattcat       360
     caacaaaatg aaatctgaat atatcaagca gtgcacagta cttgataaat gggaagagga       420
     atataatagg attcggagta agaatcctga ctcatataaa attgtgttaa ctaagcaaca       480
     aaggcgcgcc atgctcaaac gtagtgtggc agagacacac aagaaactga aggaggaaaa       540
     agacattctg gatagatgca ttataggtcc gtggggtcca ccaatgaata ctctcagtat       600
     tgcatctggt ccgttaccat caacaatgga gacccaagtt aaatggccac ttcaccagac       660
     tcggtcacag cgaatcagag aggccccaag acaaccaata aaacttgggc aaggacaatt       720
     tacgaagatt attagggagc tgactgcatt aatggtggag aagtcgtttg gacttgaatt       780
     atgcgacaca cacatgcaga aagtaagcat tcaaaaactg cacaagaaag cttacttgaa       840
     gatgaacacc atgcatgaaa aaggcttcaa cagagcaaga gacatcgtag tggacaaatt       900
     cacacaacgt gcacttgagt ccatggttac atatacatca ggcaataaca ggcactcagt       960
     ccatagtata aaacctggaa gcagtggttt cgttttaaac aggaaggctc ttcatggagc      1020
     gcaatcgcga gcatatggtg aaatatttat cattcgaggc aaccatgagg gtaagctgta      1080
     tgatgcgcgc atcaaattat cgcagaccat acgcaggaag ataacacatt attctgaccc      1140
     aggttgttta aattcctgga atggttttaa cacaaccttt cag                        1183
//