ID   AB079772; SV 1; linear; genomic RNA; STD; VRL; 1124 BP.
XX
AC   AB079772;
XX
DT   16-AUG-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
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DE   Japanese yam mosaic virus gene for polyprotein, partial cds, isolate:J3.
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KW   .
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OS   Japanese yam mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1124
RA   Fuji S., Nakamae H., Furuya H., Naito H.;
RT   ;
RL   Submitted (12-FEB-2002) to the INSDC.
RL   Shin-ichi Fuji, Akita Prefectural University, Faculty of Bioresource
RL   Sciences; 241-7 Kaidobata Nishi Shimoshinjo Nakano, Akita, Akita 010-0915,
RL   Japan (E-mail:sfuji@akita-pu.ac.jp, Tel:81-18-872-1640, Fax:81-18-872-1678)
XX
RN   [2]
RA   Fuji S., Nakamae H., Furuya H., Naito H.;
RT   "High diversity of the 5'-UTR, P1 and CP genomic regions of several
RT   Japanese yam mosaic virus and heterogenous population in a yam plant";
RL   Unpublished.
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DR   MD5; 19279b805758f2dd121a24d8bcb75f2f.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1124
FT                   /organism="Japanese yam mosaic virus"
FT                   /isolate="J3"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:79917"
FT   CDS             139..>1124
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /note="5'-terminal region"
FT                   /note="first protein and helper component regiion"
FT                   /db_xref="GOA:Q8JW16"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JW16"
FT                   /protein_id="BAC07495.1"
FT                   /translation="MEAPMTYQLKFGTLPSLLIGVNGSIITTVIPPAKVITTGKTNDAR
FT                   AENTINSNRTFVQRMQKEYQKQCAMFDKWEEEYNANRMIKPESYKIKMTRQQIAAQKRR
FT                   KANVEKAKSIEQEKILNECFIGPWGPPISTKSIASGPLPSQDIVEPKWPLFVTRSQKMR
FT                   TVQPRALKLGEGSHNKLVSNITSIIMSRLLPFEIIEKNTNKLKIQRMLKRTYIKVQTAH
FT                   EENKNKVRDVRMDFFTQTILEQVVKRTSGFVRHKVEQVKPGFSGFILDKAKLEGTQSRA
FT                   LGKIFVVRGNHEGKLYDARIKLSRTIRHNIKHYADPGILFWKGFNSA"
XX
SQ   Sequence 1124 BP; 448 A; 222 C; 217 G; 237 T; 0 other;
     aaaatataaa atctcaacaa gaattaacga aagccaagaa actacaaaca aatctttgtt        60
     tacgttaaag cacaaaaacc aacaaaacac caaacaccca aacacccaat ccaacatcga       120
     aaggaaacta gcggaaacat ggaagcacca atgacatacc agctcaagtt cggaacacta       180
     ccttcactgc ttatcggagt gaatggatca atcatcacta ctgtaattcc accagctaag       240
     gttataacta ctggaaagac caatgatgca cgtgcggaaa atactataaa cagtaacaga       300
     acattcgtac agagaatgca aaaagaatat cagaagcaat gcgcaatgtt cgacaagtgg       360
     gaagaggaat acaatgcaaa ccggatgata aagcctgaat cctataaaat caaaatgacc       420
     aggcaacaaa ttgctgcaca aaagagacgc aaggccaacg tggaaaaggc aaaatcaatt       480
     gaacaagaga agattctgaa tgaatgtttc atagggccat ggggtccacc aataagtaca       540
     aagagtattg catctggacc tctgccatcc caagacattg tggaaccgaa atggccactc       600
     tttgtgactc gatcacagaa gatgaggaca gtgcagccac gagctctcaa acttggagag       660
     ggatcacaca acaaacttgt ttcaaacata acttcaatta taatgtcgag attgttaccg       720
     tttgaaataa ttgaaaagaa cactaataaa ctcaaaatcc aaagaatgtt gaagagaacc       780
     tacattaaag ttcaaacagc acatgaagaa aataagaaca aagtcagaga tgtacgaatg       840
     gatttcttca cacaaaccat actggaacaa gtggtcaaaa gaacatctgg tttcgtacgc       900
     cataaagttg aacaagtgaa acctgggttc agtggattta ttctagacaa agcgaagtta       960
     gagggaacac aatcccgagc acttggaaaa atatttgttg tgcgtggtaa ccatgaagga      1020
     aagttatatg atgcacgtat aaagttgtca cgaactatac gacacaacat aaaacactat      1080
     gctgatcctg ggatcttgtt ctggaaggga tttaacagtg catt                       1124
//