ID   AB079770; SV 1; linear; genomic RNA; STD; VRL; 1325 BP.
XX
AC   AB079770;
XX
DT   16-AUG-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Japanese yam mosaic virus gene for polyprotein, partial cds, isolate:J1B.
XX
KW   .
XX
OS   Japanese yam mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1325
RA   Fuji S., Nakamae H., Furuya H., Naito H.;
RT   ;
RL   Submitted (12-FEB-2002) to the INSDC.
RL   Shin-ichi Fuji, Akita Prefectural University, Faculty of Bioresource
RL   Sciences; 241-7 Kaidobata Nishi Shimoshinjo Nakano, Akita, Akita 010-0915,
RL   Japan (E-mail:sfuji@akita-pu.ac.jp, Tel:81-18-872-1640, Fax:81-18-872-1678)
XX
RN   [2]
RA   Fuji S., Nakamae H., Furuya H., Naito H.;
RT   "High diversity of the 5'-UTR, P1 and CP genomic regions of several
RT   Japanese yam mosaic virus and heterogenous population in a yam plant";
RL   Unpublished.
XX
DR   MD5; ce6a6cec49ecdedf56b55bb383df1fed.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1325
FT                   /organism="Japanese yam mosaic virus"
FT                   /isolate="J1B"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:79917"
FT   CDS             155..>1325
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /note="5'-terminal region"
FT                   /note="first protein and helper component regiion"
FT                   /db_xref="GOA:Q8JW18"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JW18"
FT                   /protein_id="BAC07493.1"
FT                   /translation="MAACIETFAITNLSNTSAFQLQFGTLPPVTIGTFATSHEILVVEK
FT                   EQKKVNHVKPTEPRNGVNANKAFINSVQSEYKRQCAVLDKWEEEYNKIRSKSPDSYKIT
FT                   LTKQQKKAMLKRSVERAHKKLKEQEDILERCIIGPWGPPTNAFSIASGPLPSAMEAQVK
FT                   WPLHQTRSRRIKKAPRQPVELGQEKFKKLIRELTTLMVERAFTLELCDKSTQRVSIQKQ
FT                   HKKYYLKMNTMHERGLNKARDIVMDKFAQRVLELMVARTSGNNKHSVHNIKPGNSGFVL
FT                   SKRNLHGTQSRAYGEIFIVRGNHEGKLYDARIKLSQTIRRKIIHYSDPGVKFWNGFNTA
FT                   FQKYRKQDREHTCETDLDVEECGEVAALLCLALFPCGKITCNRCVEENLL"
XX
SQ   Sequence 1325 BP; 472 A; 280 C; 278 G; 295 T; 0 other;
     aaaatataaa atctcaacaa gaatcaacga aaactaagac aacaaactct ttgttaacgt        60
     ttgcttctaa acactcggat tataaatcca aaccacacaa tccgcaaaga atcgtgcgtt       120
     ccggtctttg cacttcacac tcacacaaac aaccatggca gcatgcattg agacattcgc       180
     aatcacgaac ttgagcaaca catccgcgtt tcagcttcaa tttgggacac ttccacctgt       240
     aaccatcggt acatttgcaa cttcacatga aatactggta gtggaaaaag agcagaaaaa       300
     ggtaaatcat gtcaagccca ctgaaccgcg caatggtgtg aatgcaaata aggcattcat       360
     caacagtgtg caatctgaat ataaaagaca gtgcgcggtg cttgacaaat gggaagaaga       420
     gtataacaaa atccggagta agagtcctga ctcatacaaa atcacgttga ctaagcaaca       480
     gaagaaagcc atgcttaaac gcagcgtgga aagagcacac aagaaactga aggaacagga       540
     agacattctg gaaagatgca ttataggtcc gtggggccca cccacgaatg cttttagcat       600
     tgcctctggg ccactaccat cagcaatgga ggctcaagtt aagtggccac tccaccaaac       660
     tcgttcacga cgaatcaaga aagccccaag acaaccagta gaacttgggc aagagaagtt       720
     caagaagctc attagggagc ttactacact tatggtagag agggcattca cactcgaact       780
     gtgtgacaaa agcactcaga gagtgagcat tcagaaacag cacaagaaat attacttgaa       840
     aatgaacacg atgcatgaaa gaggtctcaa caaagcaaga gatatcgtga tggataaatt       900
     tgcacaacgt gtacttgaac ttatggttgc acgcacatca ggcaacaaca agcactcagt       960
     ccataatata aaacctggaa acagtggttt tgttttaagc aagagaaatc tgcatggaac      1020
     acaatcgcga gcttatggtg aaatatttat tgttcgtggc aatcatgaag gtaagctgta      1080
     tgatgcacgc atcaaattat cacaaacaat acgcaggaag ataatacact attccgaccc      1140
     aggtgtcaaa ttctggaatg gattcaatac agctttccaa aaatatagga agcaagatcg      1200
     cgaacacaca tgcgaaacag atcttgatgt tgaggaatgt ggcgaggttg ctgccctatt      1260
     gtgtctcgct ctttttcctt gtggtaaaat aacatgcaat aggtgtgtgg aagaaaacct      1320
     attgt                                                                  1325
//